Pairwise Alignments

Query, 1767 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3

Subject, 1248 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  495 bits (1274), Expect = e-143
 Identities = 284/647 (43%), Positives = 414/647 (63%), Gaps = 24/647 (3%)

Query: 907  KALFDGSTIGIVNVDAKGVILDCNDQYCEDMGQTRESLCG----VPIFDVLSLQDKETAK 962
            +A+F+ +T+GI  +  + VI+  N +  +  G     L G    +   D  +  D   A 
Sbjct: 590  QAIFEAATVGIAFLKNR-VIVRGNPRLDKLFGYGPGELVGQSTRIWFADDAAFADVGGA- 647

Query: 963  AQFRELAEGKVDHYRGERSFIRPNGEPLWMTVNVSALFDSQKQFESAVVSMVDMTELKLL 1022
              +  L+ G+V  ++ E+ ++R +    W  ++ SA+ D        V  + D+T+ +  
Sbjct: 648  --YEALSRGEV--HQREQEYLRKDQSRFWCRISGSAI-DPSDLSRGTVWMLEDVTQARAT 702

Query: 1023 SDELLVAKEEADAASKAKGDFLANMSHEIRTPMNAIIGMSQLCLQTALDKKQKNYVEKIE 1082
            ++    AK+ A+ A++ K DFLANMSHEIRTPMNAIIGM+ L L+T LD +QK+YV KI+
Sbjct: 703  AEAQARAKDAAEDAARTKSDFLANMSHEIRTPMNAIIGMAHLALKTDLDPRQKDYVRKIQ 762

Query: 1083 RASKSLLSIINDILDFSKIEAGKLDIESVPFQLDTMLEDLSDMFSEKAAHKQLELLFAVA 1142
            ++ + LL IINDILDFSKIEAGKL++E+    LD +LE++ ++ SEKA  K LELLF V 
Sbjct: 763  QSGQHLLGIINDILDFSKIEAGKLEVEATEIHLDKVLENVGNLISEKATAKGLELLFDVG 822

Query: 1143 PNVPRHLFGDSLRLGQVLINLMNNAIKFTERGEVLLSLNLVEQQNDDVVLRFSVRDSGIG 1202
              VP  L GD+LRLGQVLIN  NNA+KFTE GE+++++ L+E    DV+LRF VRD+GIG
Sbjct: 823  AGVPLDLMGDALRLGQVLINYANNAVKFTEAGEIVVAVRLMEDLGPDVMLRFEVRDTGIG 882

Query: 1203 LTADQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQLVELMGGTIGVESQFGHGSTFYFT 1262
            LT +Q+A+LF+SFSQADTSTTRK+GGTGLGLAI K+L ELMGG++GV+S  G GSTF+FT
Sbjct: 883  LTDEQKARLFQSFSQADTSTTRKFGGTGLGLAISKKLAELMGGSVGVDSVPGQGSTFWFT 942

Query: 1263 VKLQISSGQKLTVAQ-ELEGMPILVADDNATARDIMRTTLESMGFRVDTVRSGEEAV--- 1318
             +L     +   + + EL+G  +LV DDN  AR ++   L +M F VD V SG +A+   
Sbjct: 943  ARLGKGKPRAPLIPEAELQGRRMLVVDDNENARAVLVDMLSAMSFEVDAVDSGAKALDAI 1002

Query: 1319 -TRCIQQEYAVALIDWKMPNLDGIETAKQIKQ-QAKKAPRILMVSAHANQDFLSQIEELG 1376
                +   Y V  +DW+MP++DG+E A+QI   +    P ++MV+A+  ++ +   +   
Sbjct: 1003 RDAVLDLPYDVVFLDWQMPDMDGLEVAEQIHSIRLPFPPHLIMVTAYGREEIIKGAQAAD 1062

Query: 1377 LAGYISKPISASRLLDGIIN---SLGRAGVLPVRRQSESIDPKLLLPLKGKRILLVEDNE 1433
            +   + KP+S + L D I+    S  R        +  S+D      L+G ++LLVEDN+
Sbjct: 1063 IGEVLIKPVSPAALFDSIMRVFASDQRRDEAEDVSEGGSVDH---AALRGLKVLLVEDND 1119

Query: 1434 MNLEVATEFLEQVGIILSIATNGQIALDKLEQQSFDLVLMDCQMPVMDGYQATQALRKRP 1493
            +N EVA E L   GI + IA NG IA++K     +DL+LMD QMPVMDG  AT+ +R+  
Sbjct: 1120 LNQEVAGEILRDAGIEVEIADNGLIAVEKARAGVYDLILMDMQMPVMDGVTATREIRRLG 1179

Query: 1494 ELTELPVVAMTANAMAGDKEMCLRAGMNDHIAKPIEVNLLYQTLLKY 1540
             + +LP++AMTANAM  D++ CL AGMNDHIAKPI+ + ++ T+ ++
Sbjct: 1180 HV-DLPIIAMTANAMQADRDKCLEAGMNDHIAKPIDPDTMFSTISRW 1225