Pairwise Alignments
Query, 1767 a.a., multi-sensor hybrid histidine kinase (RefSeq) from Shewanella sp. ANA-3
Subject, 1616 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1
Score = 587 bits (1513), Expect = e-171
Identities = 413/1194 (34%), Positives = 613/1194 (51%), Gaps = 63/1194 (5%)
Query: 600 EFVAEIALSILPADHEGRRQVAASIRDMTQKLAVEQKIRD-SELRFRGLVTNIPGAVYRT 658
E + E LS E + A + + T++L + + S R + ++P A +R
Sbjct: 449 EAMREALLSSTTRLEEANTTLEARVLERTEELEHSKSTAEWSRQLMRDMADSLPCAAFRF 508
Query: 659 RI---GDVWVMEYVSDNIADITGFAASQFIENRQRTFASLILEEDRELCHQHIDRALAQQ 715
+ GD ++S +I G+ + I F I D HQ ++ AL +
Sbjct: 509 EVAPSGDQ-SFRFISAKAEEIWGYTPDELINEPDLRFWR-IHPGDLAKAHQALEEALLEG 566
Query: 716 ETFEVEYRIRHRDGSIRWVHEKGKASYTEEGFPLWFDGSIDDITESKLAMVELEASRLQL 775
+ YR+ +R G RW+ + AS +G +W +G D+TE + A+ + + +
Sbjct: 567 SSTNQLYRVMNRHGEARWIETRAMASRLADGTRVW-NGYWLDVTEREEALAAMTGAMEEQ 625
Query: 776 TNITESIPCTVYQLRWVSPADHTFTFLSGAAFHMLGLHREDLLKDFNIIA---ERIFDEE 832
+ I +S + +R D + + +LG +L + E F+
Sbjct: 626 SAIFQSAGLGIAVIR-----DRHIVRSNKSLAQLLGYGPSELDGQSTGVVFANEGDFERM 680
Query: 833 RPEVVRALAGKSEDKLQWVREFRYRHPNGSIRWMEAGASGHYNDDGAI----IWNGYVMD 888
E ALA + W YR NG+ W SG D G + +W D
Sbjct: 681 GREAYPALAQGETFQGDW----EYRRKNGTTFW--GRTSGRAIDSGDLSKGSVW--VCDD 732
Query: 889 ITERKAIEEELAVSEAHFKALFDGSTIGIVNVDAKGVILDCNDQYCEDMGQTRESLCGVP 948
IT+R+ E L +E +AL + + + +G D + MG+ + GV
Sbjct: 733 ITDRRNWEHRLQQAEERLRALTNSVPAAVFELRNEG-----EDFWFTFMGRQVRGILGVG 787
Query: 949 IFDVLSLQ----------DKETAKAQFRELAEGKVDHYRGERSFIRPNGEPLWMTVNVSA 998
+L+ D+ET ++ E V R + GE W+ +
Sbjct: 788 ADQLLANAGRLYGTVRDGDRETLESVIEGALEQGVRFSTQYR--LDAPGEERWVRMEAVP 845
Query: 999 LFDSQKQFESAVVSMVDMTELKLLSDELLVAKEEADAASKAKGDFLANMSHEIRTPMNAI 1058
+ +Q + D++ KL L AKE A+ A++ K DFLANMSHEIRTPMNAI
Sbjct: 846 IV-AQAGGGTWAGFFQDVSAEKLAEAALTRAKELAEDATRMKSDFLANMSHEIRTPMNAI 904
Query: 1059 IGMSQLCLQTALDKKQKNYVEKIERASKSLLSIINDILDFSKIEAGKLDIESVPFQLDTM 1118
IGMS L L+T L +Q +YV+KI+ A + LL IINDILDFSKIEAGKL +E F+LD +
Sbjct: 905 IGMSHLALKTELTPRQHDYVKKIQSAGQHLLGIINDILDFSKIEAGKLAVEHTDFELDKV 964
Query: 1119 LEDLSDMFSEKAAHKQLELLFAVAPNVPRHLFGDSLRLGQVLINLMNNAIKFTERGEVLL 1178
L++++++ +EK K LEL+F + VPR L GDSLRLGQ+LIN NNA+KFTE GE+ +
Sbjct: 965 LDNIANLLTEKTRAKSLELVFDIPSEVPRTLVGDSLRLGQILINYANNAVKFTENGEIDI 1024
Query: 1179 SLNLVEQQNDDVVLRFSVRDSGIGLTADQQAKLFKSFSQADTSTTRKYGGTGLGLAICKQ 1238
+ E+ +V+L F+VRD+GIG+TA+Q A+LF+SF QADTSTTRK+GGTGLGLAI K+
Sbjct: 1025 IARVKERSETEVLLYFAVRDTGIGITAEQAARLFQSFEQADTSTTRKFGGTGLGLAISKR 1084
Query: 1239 LVELMGGTIGVESQFGHGSTFYFTVKLQISSGQK--LTVAQELEGMPILVADDNATARDI 1296
L ELMGG +GVES++G GSTF+FT ++ I + +K L + +L G +LV DDN AR +
Sbjct: 1085 LAELMGGEVGVESEYGKGSTFWFTARMGIGTVRKRRLLPSPDLRGRRVLVVDDNDNARTV 1144
Query: 1297 MRTTLESMGFRVDTVRSGEEAVTRCIQ-----QEYAVALIDWKMPNLDGIETAKQIKQQA 1351
+ + M F+V T SG EAV + Y + L+DW+MP +DGIETA +
Sbjct: 1145 LADLMAGMTFQVTTRASGLEAVDEVKRAAMAGTPYEIVLLDWRMPGMDGIETAHHLMALG 1204
Query: 1352 -KKAPRILMVSAHANQDFLSQIEELGLAGYISKPISASRLLDGIINSLGRAGVLPVRRQ- 1409
APR+LMV+A+ ++ L+ I E G+ + KP+SAS L D I+ G P
Sbjct: 1205 LDPAPRLLMVTAYGREEVLNLITEAGIEDVLIKPVSASILFDTIMRLFGCQPAEPRDVDG 1264
Query: 1410 SESIDPKLLLPLKGKRILLVEDNEMNLEVATEFLEQVGIILSIATNGQIALDKLEQQSFD 1469
S L ++G RILLVEDN++N +VATE L G + +A +G IAL K+ + ++D
Sbjct: 1265 GHSSSEMHLETIRGARILLVEDNDLNQQVATELLGDAGFQVDVADDGAIALAKVRRNAYD 1324
Query: 1470 LVLMDCQMPVMDGYQATQALRKRPELTELPVVAMTANAMAGDKEMCLRAGMNDHIAKPIE 1529
+VLMD QMPVMDG AT+ +R+ + LP+VAMTANAM D++ CL AGMND I KPI+
Sbjct: 1325 MVLMDMQMPVMDGVAATREIRRLGQFDHLPIVAMTANAMQRDRDRCLDAGMNDFITKPID 1384
Query: 1530 VNLLYQTLLKYLGGSASLVDNTEPSQLVDIPVKPINLDSESVVKWPEHPELDIDRGLQLV 1589
+ L+ LL+++ S P+ + S+ P LD GL+ V
Sbjct: 1385 PDQLWAALLRWIAPRHS------PAAAHGASAPSETGEEHSI---PRIDGLDTTTGLRRV 1435
Query: 1590 QNSTRLYQRSFDRFVTSQRNVVDLINKALANDKRDDAVRMAHTLKGLAGNLSSSKLVELA 1649
Q TRLY S +F +++V I AL D A R+AHT KGLAG + + ++ A
Sbjct: 1436 QGKTRLYLTSLRKFAAGRKSVAGDIRAALEADDWSTAERLAHTTKGLAGMIGADEVQRRA 1495
Query: 1650 RQLELHLSEKSEYQTELDQIQALVASICDAIERVKPQFEESTTSTSEQLSPEALVTALKQ 1709
LE L +K Q D + A+ A + I + T + AL A ++
Sbjct: 1496 ADLEAALCDKLSRQEVEDLLDAMAAPLAALIAALDSTLPPEETIAPVAIDRAALDAACQR 1555
Query: 1710 LRQSLEDADSDAVAQIDALKPQVSSKLWLQLSPALTMINQYQFDEAVDLIDEVL 1763
L L + D++A ++A + + I + FD+A+ + E +
Sbjct: 1556 LLILLAEDDAEADDVLEANAGLLQTAFPDHFPRIRAAIKDFNFDQALATLTEAV 1609
Score = 66.2 bits (160), Expect = 3e-14
Identities = 132/629 (20%), Positives = 244/629 (38%), Gaps = 76/629 (12%)
Query: 201 LALDKLPEQLGVQPSQL-VVLDDQGRLI-------FHSDKEKVLAVTSAEWLDRNTRRNS 252
L L Q+ P+ + ++LDDQG+L+ F SD E AV D+N
Sbjct: 267 LDLSHFTRQVKAGPNGMGMLLDDQGQLVGVPRMPRFDSDDEIKKAVLKP-LADQNLPALV 325
Query: 253 DFWTLLDK-----GLNGQARFIDDKSTVYLASVASVAKLKWRVIVMVPEHQLFATLLDDV 307
+ W L + G R D + + +A + W + V+ P H + +
Sbjct: 326 EGWRLWNDLGRPDGSLNPMRIDGDVWFSHFSRMAIGSNPIW-LGVIAPRHDFIPVGREQI 384
Query: 308 ASVVLNLSLLTLLLLLTCYIAAKRLTRPLEALESGILAFGQ-------------GKAQQL 354
++L + + L A+R PLEAL + G+ G+ Q+L
Sbjct: 385 ILLILLILASLAMAALVTLPMARRFAAPLEALAQESIRIGRLDLARPVNVASDLGEIQEL 444
Query: 355 AIPKGAVSEIVTLSSTFNQMAEL-----LGEREQAILDSRGNR------FARLIDGMSDK 403
+ + A+ E + S+T + A + ER + + S+ + D +
Sbjct: 445 SAAQEAMREALLSSTTRLEEANTTLEARVLERTEELEHSKSTAEWSRQLMRDMADSLPCA 504
Query: 404 SFYCSLDPSG--QLAQVSEGVTKVLGMSP-ELLKRKYQRLFTANP--LNEKNWEYTDLAL 458
+F + PSG +S ++ G +P EL+ R + +P L + + + L
Sbjct: 505 AFRFEVAPSGDQSFRFISAKAEEIWGYTPDELINEPDLRFWRIHPGDLAKAHQALEEALL 564
Query: 459 KGENVPSHQVELLDASGHPRMLDL-FMLPLVSDTGELMSVEMLFTDVTEQ-------FSA 510
+G + + +++ G R ++ M ++D + + L DVTE+ A
Sbjct: 565 EGSST-NQLYRVMNRHGEARWIETRAMASRLADGTRVWNGYWL--DVTEREEALAAMTGA 621
Query: 511 ATWSNAVLEAAPEAMLIVEQMGSIVFTNTRCQILFGYDANSMLGLQVESLLPEAMRSNHA 570
+A+ ++A + ++ IV +N L GY + + G +
Sbjct: 622 MEEQSAIFQSAGLGIAVIRDR-HIVRSNKSLAQLLGYGPSELDGQSTGVVF--------- 671
Query: 571 RDRLQFLREGRDRPMANAR------HVRALKADGGEFVAEIALSILPADHEGRRQVAASI 624
+ F R GR+ A A+ + +G F + + + + V
Sbjct: 672 ANEGDFERMGREAYPALAQGETFQGDWEYRRKNGTTFWGRTSGRAIDSGDLSKGSVWV-C 730
Query: 625 RDMTQKLAVEQKIRDSELRFRGLVTNIPGAVYRTR-IGDVWVMEYVSDNIADITGFAASQ 683
D+T + E +++ +E R R L ++P AV+ R G+ + ++ + I G A Q
Sbjct: 731 DDITDRRNWEHRLQQAEERLRALTNSVPAAVFELRNEGEDFWFTFMGRQVRGILGVGADQ 790
Query: 684 FIENRQRTFASLILEEDRELCHQHIDRALAQQETFEVEYRIRHRDGSIRWVHEKGKASYT 743
+ N R + + + + DRE I+ AL Q F +YR+ G RWV +
Sbjct: 791 LLANAGRLYGT-VRDGDRETLESVIEGALEQGVRFSTQYRL-DAPGEERWVRMEAVPIVA 848
Query: 744 EEGFPLWFDGSIDDITESKLAMVELEASR 772
+ G W G D++ KLA L ++
Sbjct: 849 QAGGGTW-AGFFQDVSAEKLAEAALTRAK 876