Pairwise Alignments

Query, 206 a.a., Na(+)-translocating NADH-quinone reductase subunit D (RefSeq) from Shewanella sp. ANA-3

Subject, 230 a.a., Electron transport complex protein RnfE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  123 bits (308), Expect = 3e-33
 Identities = 76/211 (36%), Positives = 119/211 (56%), Gaps = 18/211 (8%)

Query: 7   MRDMLAGPVFANNPVAMQVLGVCSALAVSNSMQTAVVMTLAVTFVLVFSNLIISAIRNFI 66
           ++D++   ++ NN   +Q+LG+C  LAV+++   A+ + LA T VL  +NL +SA+R + 
Sbjct: 4   IKDIVVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTVSALRRWT 63

Query: 67  PNSVRIIAQMTVIASLVIIVDMVLQDVAYELSKQLSVFVGLIITNCIIMGRAEAFAMKYP 126
           P  +RI   + +IAS+V  V M++   A+ L + L +F+ LI+TNCI++GRAEAFA K  
Sbjct: 64  PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKG 123

Query: 127 PHLAVVDAVGNAAGYGLVLISVAFVRELLGTGNLF--GHSVLTTVENGGW--YLPNEMF- 181
           P L+ +D      G    +  +  +RE+LG G LF    S+L     GGW   L  E+F 
Sbjct: 124 PWLSALDGFSIGMGATGAMFVLGSLREILGNGTLFDGADSLL-----GGWAKVLRVEIFH 178

Query: 182 --------KLPPSAFFLIGLLIWTINVIQRK 204
                    LPP AF  +GL++    +I  K
Sbjct: 179 TDSPFLLAMLPPGAFIGLGLMLAVKYLIDEK 209