Pairwise Alignments

Query, 432 a.a., N-acetylglucosamine transporter nagP (from data) from Shewanella sp. ANA-3

Subject, 436 a.a., MFS transporter from Bacteroides stercoris CC31F

 Score =  120 bits (301), Expect = 8e-32
 Identities = 116/456 (25%), Positives = 204/456 (44%), Gaps = 59/456 (12%)

Query: 3   LDKSQQKSSFLPMAIVAALFFILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIAVT 62
           + + +Q  + + + ++  LF ++ F T L   +   LK    +  +  +L +F+ +IA  
Sbjct: 1   MTQQKQNGNIVAIIVMIFLFGMISFVTNLASPMGDILKFQFGVPNWMGTLGVFANFIAYA 60

Query: 63  FTALPSAWVIRKVGYKNGMAL-------GMGIMMLAGLLFIPAAKTQIFGLFLCAQLVMG 115
               P+  +++K+GYK    +       G+GI  L+G+          FG++L    + G
Sbjct: 61  VMGYPAGNMLQKMGYKKTALIAITVGFIGVGIQTLSGV-------AGSFGIYLLGAFIAG 113

Query: 116 TGQTLLQTAVNPYVVRLGPEESAAARVSVMGILNKGAGVIAPLVFSALILDSFKDRIGTT 175
               LL T VNP +  LG            G  NKG  +I        +  SF    GT+
Sbjct: 114 FSMCLLNTVVNPMLNTLG------------GGGNKGNQLIQ-------LGGSFNSLAGTS 154

Query: 176 ---LTQVQIDEMAN---SLVFPYLGMAIFIGVLA-LAVKKSPLPELSNEDEVAEHTDKGQ 228
              LT + I  + N   S VFP +  A+ I   A + +  S +PE   + EV   T   Q
Sbjct: 155 VIILTGILIPSITNAKISDVFPLMYAALAIFAFAFIVIFFSTIPE-KEKQEVKIDTTPSQ 213

Query: 229 IKAALSHPNLAFGVIALFVYVAVEVIAGDTIGTFALSLGVEHYGV-----------MTSY 277
               LS  +  FG I +FVYV +EV   + +  +  +  ++  GV           +T+ 
Sbjct: 214 Y-GPLSFRHFIFGAIGIFVYVGIEVGVPNVLNKWLQNPDLDVLGVNGAGAEAIAGSVTAT 272

Query: 278 TMVCMVLGYTLGIILIPRFISQPTALMISAILGLLLTLAILFGDN----NSYAIANALLV 333
             + M++G  +G  +  + IS    L  ++++G+ L ++ +F       N     N+   
Sbjct: 273 YWLLMLVGRLIGASIGSK-ISAKAMLGTASVIGIFLVISAMFAPTDLMVNMPVFKNSAEE 331

Query: 334 PFGGVALPDTLLFIAFLGLANAIVWPAVWPLALSGLGKLTSTGSALLIMGIAGGAFGPLF 393
            FG V +P   +F+A +GL  +I+W  ++ LA+ GLGK T   S + ++ + GG   PL 
Sbjct: 332 MFGLVNVPVNAMFLALVGLCTSIMWGGIFNLAVEGLGKYTEKASGIFMVLVCGGGILPLL 391

Query: 394 WGLTSSATD-MGQQGGYMVMLPCYLFILFYAVKGHK 428
                   D +G    Y +++    ++L+YA+ G K
Sbjct: 392 QNAIVDWNDGIGYLTSYWLIVVALAYLLYYALIGCK 427