Pairwise Alignments

Query, 432 a.a., N-acetylglucosamine transporter nagP (from data) from Shewanella sp. ANA-3

Subject, 436 a.a., L-fucose:H+ symporter permease from Bacteroides ovatus ATCC 8483

 Score =  124 bits (311), Expect = 6e-33
 Identities = 112/446 (25%), Positives = 200/446 (44%), Gaps = 47/446 (10%)

Query: 10  SSFLPMAIVAALFFILGFATWLNGSLMPYLKQILQLNPFQASLILFSFYIAVTFTALPSA 69
           S  +P  ++ + F + GFA  +   ++    +I +++    +L+  +FY      A P+A
Sbjct: 15  SYLIPFILITSCFALWGFANDITNPMVKAFSKIFRMSATDGALVQVAFYGGYFAMAFPAA 74

Query: 70  WVIRKVGYKNGMALGMGIMMLAGLLFIPAAKTQIFGLFLCAQLVMGTGQTLLQTAVNPYV 129
             IRK  YK G+ LG+G+      LF PA  T  +  FL A  ++  G + L+T+ NPY+
Sbjct: 75  IFIRKYSYKAGVLLGLGMYAFGAFLFFPAKMTGEYYPFLIAYFILTCGLSFLETSCNPYI 134

Query: 130 VRLGPEESAAARVSVMGILNKGAGVIAPLVFSALILDSF-----KDR--IGTTLTQVQID 182
           + +G EE+A  R+++    N    ++   V    I         +DR  +  +  Q   +
Sbjct: 135 LSMGTEETATRRLNLAQSFNPMGSLLGMYVAMQFIQAKLHPMCTEDRALLNDSEFQAIKE 194

Query: 183 EMANSLVFPYLGMAIFIGVLALAVKKSPLPELSNEDEVAEHTDKGQIKAALSHPNLAFGV 242
              + L+ PYL + + I  + L ++   +P+  N D+         +K   +      GV
Sbjct: 195 SDLSVLIAPYLIIGLIIVAMLLLIRFVKMPK--NGDQNHRIDFFPTLKRIFTQTRYREGV 252

Query: 243 IALFVYVAVEVIAGDTI---GT-FALSLGVEHYG---VMTSYTMVCMVLGYTLGII--LI 293
           IA F YV  +++    I   GT   +S G++      +   Y ++ MV+      I   I
Sbjct: 253 IAQFFYVGAQIMCWTFIIQYGTRLFMSQGMDEKSAEVLSQQYNIIAMVIFCISRFICTFI 312

Query: 294 PRFISQPTALMISAILGLLLTLAILFGDNNSYAIANALLVPFGGVALPDTLLFIAFLGLA 353
            R+++    LMI AI G + TL ++F  N            FG       +  +  +   
Sbjct: 313 LRYLNAGKLLMILAIFGGIFTLGVIFLQN-----------IFG-------MYCLVAVSAC 354

Query: 354 NAIVWPAVWPLALSGLGKLTSTGSALLIMGIAGGAFGPLFWGLTSSATDMGQ-------Q 406
            ++++P ++ +AL G+G     G+A LIM I GG+  P    L +S  D+ Q        
Sbjct: 355 MSLMFPTIYGIALKGMGDDAKFGAAGLIMAILGGSVLP---PLQASIIDLEQIAWLPAVN 411

Query: 407 GGYMVMLPCYLFILFYAVKGHKMRHW 432
             +++   C+L I+ Y  +  K R+W
Sbjct: 412 VSFILPFICFLVIIGYGYRTVK-RNW 436