Pairwise Alignments

Query, 530 a.a., N-6 DNA methylase (RefSeq) from Shewanella sp. ANA-3

Subject, 519 a.a., Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 81.6 bits (200), Expect = 6e-20
 Identities = 97/422 (22%), Positives = 173/422 (40%), Gaps = 61/422 (14%)

Query: 1   MTQND----IVQKLWNLCDILRD--DGINYSDYVTELVLLLFIKMVHEN----------- 43
           MT N+    + +K+W++ + +R   DG ++  YV      LF + + EN           
Sbjct: 1   MTSNEQRAALQRKIWDIANKVRGAVDGWDFKQYVLGT---LFYRFISENFIDYITGSDTS 57

Query: 44  -TEAELLDKHTLPEGYRWTDLHTKSGINLLNDYKALLLA-LSTGKRVMLDPNDPEKTIEV 101
              A + D     E  +   + TK      +     ++A  +T + +  D  +  K IE 
Sbjct: 58  VNYAAMADDDENIEAAKDDVIKTKGYFIYPSQLFVNVVANANTNESLNTDLANIFKAIEA 117

Query: 102 QVHNDPL---ISAIYADAQTRLR--------EPRHLEQITKTLDQIDW--FSAKR-DGLG 147
                P    I  ++AD  T           +   L  + K + ++D+  F A   D  G
Sbjct: 118 SASGYPSEQDIKGLFADFDTTSNRLGNTVKDKNSRLAAVLKGVAELDFGGFDANHIDLFG 177

Query: 148 DLYEGLLEKNASETKSGAGQYFTPRVLINSMVRCIK--PQAGEYIQDPAAGTAGFLIAAH 205
           D YE L+   A+      G++FTP+ +   + +       +   I DPA G+   L+   
Sbjct: 178 DAYEFLISNYAANAGKSGGEFFTPQQVSKLIAKLAMYGQTSINKIYDPACGSGSLLL--- 234

Query: 206 EYIKAQPEYDDLSLKQIDFQRYHAYVGVELVPNTRRLALMNCLLHGMEGDDDGVVHLGNA 265
              +A+ ++DD  ++         + G E+   T  LA MN  LH +  D   +  LGN 
Sbjct: 235 ---QAKKQFDDHLIED-------GFFGQEINHTTYNLARMNMFLHNVNYDKFSI-QLGNT 283

Query: 266 LGNVG-QSLKPADVILANPPFGTSKGG--EASITRDD------LTFDTSNKQLAFLQHIY 316
           L        +P D I++NPP+     G  + ++  D+      +    S    AF+ H  
Sbjct: 284 LEEPHFADGRPFDAIVSNPPYSVKWIGSDDPTLINDERFAPAGVLAPKSKADFAFVLHAL 343

Query: 317 RNLKPGGRAAVVLPDNVLFEAGKGTDIRRDLMDKCNLHTILRLPTGIFYAQGVKTNVLFF 376
             L   GRAA+V    + +  G    IR+ L+D   + +++ L + +F+   +  N+L  
Sbjct: 344 NYLSAKGRAAIVCFPGIFYRGGAEQKIRKYLVDNNYVESVISLASNLFFGTTIAVNILVL 403

Query: 377 TK 378
           +K
Sbjct: 404 SK 405