Pairwise Alignments

Query, 530 a.a., N-6 DNA methylase (RefSeq) from Shewanella sp. ANA-3

Subject, 529 a.a., Type I restriction-modification system, DNA-methyltransferase subunit M (EC 2.1.1.72) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  600 bits (1547), Expect = e-176
 Identities = 304/534 (56%), Positives = 378/534 (70%), Gaps = 33/534 (6%)

Query: 1   MTQNDIVQKLWNLCDILRDDGINYSDYVTELVLLLFIKMVHENTEAELLDKHTLPEGYRW 60
           M  ND+V KLW LCD LRD G++Y +YV EL  LLF+KM  E  +    +   LPEGYRW
Sbjct: 1   MNNNDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQ----EADYLPEGYRW 56

Query: 61  TDLHTKSGINLLNDYKALLLALSTGKRVMLDPNDPEKTIEVQVHNDPLISAIYADAQTRL 120
            DL ++ G + +  Y+ LL+ L + ++                    L+ A++ +  T +
Sbjct: 57  DDLKSRIGQDQMQFYRNLLVQLGSDEK-------------------KLVQAVFHNVSTTI 97

Query: 121 REPRHLEQITKTLDQIDWFSAK----RDGLGDLYEGLLEKNASETKSGAGQYFTPRVLIN 176
            +P+ L ++   +D +DW++      RD  GD+YEGLL+KNA+ETKSGAGQYFTPR LI 
Sbjct: 98  EQPKQLTELVSYMDALDWYNGNHGKSRDDFGDMYEGLLQKNANETKSGAGQYFTPRPLIK 157

Query: 177 SMVRCIKPQAGEYIQDPAAGTAGFLIAAHEYIKAQP-EYDDLSLKQIDFQRYHAYVGVEL 235
           +++  +KPQ  E +QDPAAGTAGFLI A  Y+K+Q  + DDL     DFQ + A++G+EL
Sbjct: 158 TIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLEL 217

Query: 236 VPNTRRLALMNCLLHGMEG--DDDGVVHLGNALGNVGQSLKPADVILANPPFGTSKGGEA 293
           VP TRRLALMNCLLH +EG  D  G + LGN LG+ G++L  A ++  NPPFG++ G   
Sbjct: 218 VPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAG--T 275

Query: 294 SITRDDLTFDTSNKQLAFLQHIYRNLKPGGRAAVVLPDNVLFEAGKGTDIRRDLMDKCNL 353
           +ITR      TSNKQL F+QHI   L PGGRAAVV+PDNVLFE GKGTDIRRDLMDKC+L
Sbjct: 276 NITRT-FVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCHL 334

Query: 354 HTILRLPTGIFYAQGVKTNVLFFTKGSAKDKHQQEQCTENVWVYDLRTNMPSFGKRTPFS 413
           HTILRLPTGIFYAQGVKTNVLFFTKG+  + HQ + CT++VWVYDLRTNMPSFGKRTPF+
Sbjct: 335 HTILRLPTGIFYAQGVKTNVLFFTKGTVTNPHQDKNCTDDVWVYDLRTNMPSFGKRTPFT 394

Query: 414 DNHLAPFEQVYGEHAGGLSPRTEGEYSFGAEQVEIADTDENQGVDNRLVHSRWRCFSRDW 473
           + HL PFE VYGE   GLSPR EGE+SF AE+ E+AD++EN+  D     SRWR FSR+W
Sbjct: 395 EQHLQPFETVYGEDPHGLSPREEGEWSFNAEESEVADSEENKNTDQHQATSRWRKFSREW 454

Query: 474 IRDHKGDSLDISWLKDKDSVDAASLPEPDVLAREAKAELSAALNELDALLKALG 527
           IR  K DSLDISWLKDKDS+DA SLPEPDVLA EA  EL  AL ELDAL++ LG
Sbjct: 455 IRSAKSDSLDISWLKDKDSIDADSLPEPDVLAAEAMGELVQALGELDALMRELG 508