Pairwise Alignments

Query, 530 a.a., N-6 DNA methylase (RefSeq) from Shewanella sp. ANA-3

Subject, 529 a.a., DNA methyltransferase M from Escherichia coli BL21

 Score =  606 bits (1563), Expect = e-178
 Identities = 306/536 (57%), Positives = 379/536 (70%), Gaps = 33/536 (6%)

Query: 1   MTQNDIVQKLWNLCDILRDDGINYSDYVTELVLLLFIKMVHENTEAELLDKHTLPEGYRW 60
           M  ND+V KLW LCD LRD G++Y +YV EL  LLF+KM  E  +    +   LPEGYRW
Sbjct: 1   MNNNDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQ----EAEYLPEGYRW 56

Query: 61  TDLHTKSGINLLNDYKALLLALSTGKRVMLDPNDPEKTIEVQVHNDPLISAIYADAQTRL 120
            DL ++ G   L  Y+ LL+ L                      N  L+ A++ +  T +
Sbjct: 57  DDLKSRIGQEQLQFYRNLLVHLGAD-------------------NQKLVQAVFQNVNTTI 97

Query: 121 REPRHLEQITKTLDQIDWFSA----KRDGLGDLYEGLLEKNASETKSGAGQYFTPRVLIN 176
            +P+ L ++   +D +DW++      RD  GD+YEGLL+KNA+ETKSGAGQYFTPR LI 
Sbjct: 98  TQPKQLTELVSNMDSLDWYNGAHGKSRDDFGDMYEGLLQKNANETKSGAGQYFTPRPLIK 157

Query: 177 SMVRCIKPQAGEYIQDPAAGTAGFLIAAHEYIKAQP-EYDDLSLKQIDFQRYHAYVGVEL 235
           +++  +KPQ  E +QDPAAGTAGFLI A  Y+K+Q  + DDL     DFQ + A++G+EL
Sbjct: 158 TIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLEL 217

Query: 236 VPNTRRLALMNCLLHGMEG--DDDGVVHLGNALGNVGQSLKPADVILANPPFGTSKGGEA 293
           VP TRRLALMNCLLH +EG  D  G + LGN LG+ G++L  A ++  NPPFG++ G   
Sbjct: 218 VPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAG--T 275

Query: 294 SITRDDLTFDTSNKQLAFLQHIYRNLKPGGRAAVVLPDNVLFEAGKGTDIRRDLMDKCNL 353
           +ITR      TSNKQL F+QHI   L PGGRAAVV+PDNVLFE GKGTDIRRDLMDKC+L
Sbjct: 276 NITRT-FVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCHL 334

Query: 354 HTILRLPTGIFYAQGVKTNVLFFTKGSAKDKHQQEQCTENVWVYDLRTNMPSFGKRTPFS 413
           HTILRLPTGIFYAQGVKTNVLFFTKG+  + HQ + CT++VWVYDLRTNMPSFGKRTPF+
Sbjct: 335 HTILRLPTGIFYAQGVKTNVLFFTKGTVANPHQDKNCTDDVWVYDLRTNMPSFGKRTPFT 394

Query: 414 DNHLAPFEQVYGEHAGGLSPRTEGEYSFGAEQVEIADTDENQGVDNRLVHSRWRCFSRDW 473
           D HL PFE+VYGE   GLSPR+EGE+SF AE+ E+AD++EN+  D  L  SRWR F+R+W
Sbjct: 395 DEHLQPFERVYGEDPHGLSPRSEGEWSFNAEETEVADSEENKNTDQHLATSRWRKFTREW 454

Query: 474 IRDHKGDSLDISWLKDKDSVDAASLPEPDVLAREAKAELSAALNELDALLKALGGA 529
           IR  K DSLDISWLKDKDS+DA +LPEPDVLA EA  EL  AL ELDAL++ LG +
Sbjct: 455 IRTTKSDSLDISWLKDKDSIDADNLPEPDVLAAEAMGELVQALGELDALIRELGAS 510