Pairwise Alignments

Query, 530 a.a., N-6 DNA methylase (RefSeq) from Shewanella sp. ANA-3

Subject, 574 a.a., type I restriction-modification system, M subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  110 bits (274), Expect = 2e-28
 Identities = 76/252 (30%), Positives = 118/252 (46%), Gaps = 25/252 (9%)

Query: 144 DGLGDLYEGLLEKNASETKSGAGQYFTPRVLINSMVRCIKPQAGEYIQDPAAGTAGFLIA 203
           D LG  YE L++  A       G+++TP  +++ +V  +KP+AG  I DP +G+ G L+ 
Sbjct: 159 DLLGTAYEYLIKMFADSAGKKGGEFYTPSEVVSLLVALLKPKAGMRIYDPTSGSGGMLVQ 218

Query: 204 AHEYIKAQPEY-DDLSLKQIDFQRYHAYVGVELVPNTRRLALMNCLLHGMEGDDDGVVHL 262
              Y+ A  E   +LSL            G E+  NT  +  MN  LHG+   D   +  
Sbjct: 219 TRNYLAAHGENPGNLSL-----------FGQEMNLNTWAICKMNMFLHGVLSAD---IRK 264

Query: 263 GNAL----GNVGQSLKPADVILANPPFGTSKGGEASITRDD---LTFDTSNK---QLAFL 312
           G+ L       G  L   D ++ANPPF  +K G+     D      + T  K    LAF+
Sbjct: 265 GDTLREPKHTEGGELMTFDRVIANPPFSLAKWGKDECDNDGFGRFPYGTPPKDAGDLAFV 324

Query: 313 QHIYRNLKPGGRAAVVLPDNVLFEAGKGTDIRRDLMDKCNLHTILRLPTGIFYAQGVKTN 372
           QH+  +    G   VV+P  VLF       IR+ +++   L  ++ LP+G+FY  G+   
Sbjct: 325 QHMIASTNAEGMVGVVMPHGVLFRGSSEKAIRQGILEDDLLEAVIGLPSGLFYGTGIPAC 384

Query: 373 VLFFTKGSAKDK 384
           +L   K  A ++
Sbjct: 385 LLIINKRKAAER 396