Pairwise Alignments

Query, 530 a.a., N-6 DNA methylase (RefSeq) from Shewanella sp. ANA-3

Subject, 874 a.a., type I restriction-modification system, M subunit (RefSeq) from Shewanella sp. ANA-3

 Score = 86.3 bits (212), Expect = 4e-21
 Identities = 75/266 (28%), Positives = 121/266 (45%), Gaps = 33/266 (12%)

Query: 144 DGLGDLYEGLLEKNASETKSGAGQYFTPR---VLINSMVRC-IKPQAGEYIQDPAAGTAG 199
           D LG +YE L+EK A+     AG+++TP    VL++ ++   +K +    I DP +G+  
Sbjct: 163 DVLGYIYEYLIEKFAANAGKKAGEFYTPHEVSVLMSHIIAHELKHKDTIEIYDPTSGSGS 222

Query: 200 FLIAAHEYIKAQPEYDDLSLKQIDFQRYHAYVGVELVPNTRRLALMNCLLHGMEG----- 254
            LI   E ++   +  D             Y   EL  NT  L  MN ++ G++      
Sbjct: 223 LLINIGEAVEKYAKSKDSI----------TYYAQELKANTYNLTRMNLIMRGIKASNIKT 272

Query: 255 ------DDDGVVHLGNALGNVGQSLKPADVILANPPFGTS-----KGGEASITRDDLTFD 303
                 +DD      N       +L   D +++NPP+  +     K  +   +R  L   
Sbjct: 273 RNGDTLEDDWPYFDENDPQGTYHALY-VDAVVSNPPYSQAWDPSFKDSDPRYSRFGLAPK 331

Query: 304 TSNKQLAFLQHIYRNLKPGGRAAVVLPDNVLFEAGKGTDIRRDLMDKCNLHTILRLPTGI 363
           T     AFL H   +LKP G   +VLP  VLF  G+  +IR+ L+++ ++  I+ LP  I
Sbjct: 332 TK-ADFAFLLHDLYHLKPDGIMTIVLPHGVLFRGGEEGEIRKQLIEQNHIDAIIGLPANI 390

Query: 364 FYAQGVKTNVLFF-TKGSAKDKHQQE 388
           F+  G+ T +L    K  + DK Q +
Sbjct: 391 FFGTGIPTVILVLKQKRGSIDKPQND 416