Pairwise Alignments

Query, 364 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella sp. ANA-3

Subject, 397 a.a., multidrug efflux transport system - membrane fusion protein from Pseudomonas putida KT2440

 Score =  115 bits (288), Expect = 2e-30
 Identities = 87/336 (25%), Positives = 152/336 (45%), Gaps = 25/336 (7%)

Query: 8   PGKASKYATLGLLALIVILLL----WYLVADRMTPYSSQARVQAFVVPIATEVTGQILKV 63
           P +  K   LGLL L+++  +    WY +  R    +  A V   VV I   V G +  +
Sbjct: 16  PSRKRKAWLLGLLLLLILAGVGTWAWYSIVGRWHESTDDAYVNGNVVEITPLVAGTVTSI 75

Query: 64  YVQDNQDVAEGAPLFDIDPEPYDIALAKAKSDYETVLNSVKANNEGVKAAEAKLQAMRAS 123
              D   V  G  L   DP   ++AL  A++     +  V+     V + +A+L+  +A 
Sbjct: 76  GADDGDLVHAGQVLLQFDPADSEVALQSAEAKLARSVRQVRGLYSNVDSLKAQLETRQAE 135

Query: 124 YNNSVKDAERQERLYRQDPGAISVRRLE-------IAQASRETASSQVTAAEADVRRAIE 176
              + +D  R++ L   D GAI+   L        +AQA+  +A  Q++ + A V   + 
Sbjct: 136 LRKAQQDFNRRKVL--ADSGAIAAEELSHARDDLSVAQAAVNSARQQLSTSSALVDDTVV 193

Query: 177 AAGVNGENNSQLLSARSAVNKAERDRQNTHVVAPSRGVITDLNTDVGQFINAGAPAMTLI 236
           ++      +  +++A + + +A  D   T +VAP  G +      +GQ +  G   M +I
Sbjct: 194 SS------HPDVMAAAADLRQAYLDHARTTLVAPVTGYVAKRTVQLGQRLQPGTATMAVI 247

Query: 237 AIHDVWISADLTENNLGNIKVGNRVSILLDSMPGQL-FSGQIRSIGYGVDDGKKQAVGSL 295
            +  VWI A+  E  L  +++G  V I  D    ++ +SG + S+G G       A   L
Sbjct: 248 PLDQVWIDANFKETQLREMRIGQPVEITADVYGSEVKYSGTVDSLGAGTG----SAFALL 303

Query: 296 PTVSNSRDWLRQAQRFPVKVSFSADDMPPAANLRVG 331
           P  + + +W++  QR PV++  S D +     LR+G
Sbjct: 304 PAQNATGNWIKIVQRVPVRIHLSPDQLKDHP-LRIG 338