Pairwise Alignments

Query, 364 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella sp. ANA-3

Subject, 289 a.a., putative membrane fusion efflux protein from Pseudomonas putida KT2440

 Score =  101 bits (251), Expect = 3e-26
 Identities = 96/329 (29%), Positives = 144/329 (43%), Gaps = 56/329 (17%)

Query: 16  TLGLLALIVIL--LLWYLVADRMTPYSSQARVQAFVVPIATEVTGQILKVYVQDNQDVAE 73
           TL ++AL V+    LW      +TP++  ARV+A VV IA +V+G + ++ V DNQ V  
Sbjct: 10  TLCVVALAVLAGYQLWQYYM--LTPWTRDARVRADVVVIAPDVSGWVRELKVHDNQQVKA 67

Query: 74  GAPLFDIDPEPYDIALAKAKSDYETVLNSVKANNEGVKAAEAKLQAMRASYNNSVKDAER 133
           G  L  ID E +  AL +A +  ET            +A + +L+   A+   ++     
Sbjct: 68  GDLLMSIDRERFQAALDQASAVTET------------RAQQLRLREREAARRTAL----- 110

Query: 134 QERLYRQDPGAISVRRLEIAQASRETASSQVTAAEADVRRAIEAAGVNGENNSQLLSARS 193
                   P AIS    E AQ +   A  ++  AEA                 QL  AR 
Sbjct: 111 -------GPEAISAELRENAQINAAIARGELHEAEA-----------------QLQVARI 146

Query: 194 AVNKAERDRQNTHVVAPSRGVITDLNTDVGQFINAGAPAMTLIAIHDVWISADLTENNLG 253
            + ++E       V AP  G IT+L    G ++N G   M L+     +I A   E  L 
Sbjct: 147 NLARSE-------VRAPRSGHITNLRLAEGNYVNTGESVMALVDDSTFYIQAYFEETKLP 199

Query: 254 NIKVGNRVSILLDSMPGQLFSGQIRSIGYGVDDGKKQAVGS-LPTVSNSRDWLRQAQRFP 312
            I+VG+ V + L    G+   G + SI  G+ D         LP V  + +W+R AQR P
Sbjct: 200 RIRVGDTVKVWLMG-TGEPMQGHVESISRGITDRNSNPDSQLLPEVEPTFNWVRLAQRIP 258

Query: 313 VKVSFSADDMPPAANLRVGGQADILVYTE 341
           V++    D +P    L  G  A + V+ +
Sbjct: 259 VRIRL--DQVPEGLTLSAGMTASVQVHED 285