Pairwise Alignments

Query, 364 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella sp. ANA-3

Subject, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

 Score = 97.1 bits (240), Expect = 5e-25
 Identities = 89/331 (26%), Positives = 147/331 (44%), Gaps = 60/331 (18%)

Query: 16  TLG--LLALIVI----LLLWYLVADRM-TPYSSQARVQAFVVPIATEVTGQILKVYVQDN 68
           TLG  +L L+V+    +L+W +V   M  P++    ++A V+ IA +V+G I KV V+DN
Sbjct: 7   TLGRVVLTLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKVEVRDN 66

Query: 69  QDVAEGAPLFDIDPEPYDIALAKAKSDYETVLNSVKANNEGVKAAEAKLQAMRASYNNSV 128
           Q V  G  LF ID + + +AL +AK+                                  
Sbjct: 67  QTVKRGDVLFTIDQDRFTLALRQAKATL-------------------------------- 94

Query: 129 KDAERQERLYRQDPGAISVRRLEIAQASRETASSQVTAAEADVRRAIEAAGVNGENNSQL 188
              ERQE L +    A   R+L    A+ +   SQ  + EA  R A+  A V        
Sbjct: 95  --GERQETLAQASREAQRNRKLGNLVAAEQLEESQ--SREARARSAVSEAQV-------- 142

Query: 189 LSARSAVNKAERDRQNTHVVAPSRGVITDLNTDVGQFINAGAPAMTLIAIHDVWISADLT 248
                AV+ A+ +   + V +P  G + D      +F+ AG P ++++      +     
Sbjct: 143 -----AVDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSVVDSASYHVDGYFE 197

Query: 249 ENNLGNIKVGNRVSILLDSMPGQLFSGQIRSIGYGVDD-GKKQAVGSLPTVSNSRDWLRQ 307
           E  LG I +G+ V I +     +L  G ++S   G++D  +      LP V+ +  W+R 
Sbjct: 198 ETKLGGIHIGDAVDIRVMGDNTRL-RGHVQSFAAGIEDRDRSSGANLLPNVNPAFSWVRL 256

Query: 308 AQRFPVKVSFSADDMPPAANLRVGGQADILV 338
           AQR PV+++F  D++P    +  G  A + +
Sbjct: 257 AQRIPVRIAF--DEVPQDFRMIAGRTATVSI 285