Pairwise Alignments

Query, 293 a.a., farnesyl-diphosphate synthase (RefSeq) from Shewanella sp. ANA-3

Subject, 301 a.a., Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  198 bits (503), Expect = 1e-55
 Identities = 108/248 (43%), Positives = 145/248 (58%)

Query: 26  DTAPQLKAAMTHGALLGGKRIRPFLVYSVGQMFGVPLEKLDASAAAIECIHAYSLIHDDL 85
           D    L  AM +  L GGKR+RP LV +  +  G        +A A+E IHAYSL+HDD+
Sbjct: 33  DAPAGLGDAMRYAVLDGGKRLRPLLVLATCEAVGGHAAAAMRAACAVELIHAYSLVHDDM 92

Query: 86  PAMDDDDLRRGQPTVHIAFDEATAILAGDALQTLAFEIVTEAVPGISSEQHIAMVRALAK 145
           P MD+D LRRG+PTVH+ F EA A+LAGDALQ LAFE++      +       + R LA 
Sbjct: 93  PCMDNDVLRRGKPTVHVQFGEAQALLAGDALQALAFELLVPGDGSLGDAMSARLCRLLAL 152

Query: 146 ASGYRGMCGGQAIDLASTDKLIDLKALTQLHNMKTGALISCAVELALIAANAPKDEYQTM 205
           A+G  GM GGQA+DLAS    +D  AL  +H  KTGAL+  +V +     +        +
Sbjct: 153 AAGADGMAGGQAVDLASVGVALDQPALEAMHRRKTGALLQASVTMGAATGSPSPQSLALL 212

Query: 206 MEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDAESNKSTFPQLLGLQGAKDTAAQLIQ 265
            E+   VGLAFQV DDILD+ A +  LGK  G DA ++K TF  L+GL  A+  A +++ 
Sbjct: 213 AEYGACVGLAFQVVDDILDVTADSATLGKTAGKDAAADKPTFVSLMGLAQAQAYADRVLA 272

Query: 266 EALSALAK 273
           +A   L +
Sbjct: 273 QAHDTLRR 280