Pairwise Alignments

Query, 293 a.a., farnesyl-diphosphate synthase (RefSeq) from Shewanella sp. ANA-3

Subject, 299 a.a., Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  280 bits (716), Expect = 3e-80
 Identities = 151/263 (57%), Positives = 188/263 (71%), Gaps = 5/263 (1%)

Query: 34  AMTHGALLGGKRIRPFLVYSVGQMFGVPLEKLDASAAAIECIHAYSLIHDDLPAMDDDDL 93
           AM +GALLGGKR+RPFLVY+ GQMFGV    LDA AAA+ECIHAYSLIHDDLPAMDDDDL
Sbjct: 35  AMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDL 94

Query: 94  RRGQPTVHIAFDEATAILAGDALQTLAFEIVTEA-VPGISSEQHIAMVRALAKASGYRGM 152
           RRG PT HI F EA AILAGDALQTLAF I+++A +P ++    IAM+  LA ASG  GM
Sbjct: 95  RRGLPTCHIKFGEANAILAGDALQTLAFAIISDAPMPEVADRDRIAMIAELANASGIAGM 154

Query: 153 CGGQAIDLASTDKLIDLKALTQLHNMKTGALISCAVEL-ALIAANAPKDEYQTMMEFAHA 211
           CGGQA+DLA+  + I L AL ++H  KTGALI  AV L AL A +  ++    +  +A +
Sbjct: 155 CGGQALDLAAEGQRITLDALERIHRHKTGALIRAAVRLGALSAGDKGRNTLPILDRYAES 214

Query: 212 VGLAFQVQDDILDIIATTEELGKPQGSDAESNKSTFPQLLGLQGAKDTAAQLIQEA---L 268
           +GLAFQVQDDILD++  T  LGK QG+D +  KST+P LLGL+ A++ A  LI++A   L
Sbjct: 215 IGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARNKARDLIEDARQSL 274

Query: 269 SALAKLPYNSQLIADFARYIIER 291
             LA    ++  +   A YII+R
Sbjct: 275 HQLAAQSLDTSALEALANYIIQR 297