Pairwise Alignments

Query, 861 a.a., PII uridylyl-transferase (RefSeq) from Shewanella sp. ANA-3

Subject, 940 a.a., protein-PII uridylyltransferase from Caulobacter crescentus NA1000 Δfur

 Score =  363 bits (931), Expect = e-104
 Identities = 259/819 (31%), Positives = 406/819 (49%), Gaps = 28/819 (3%)

Query: 57  IALIAVGGYGRGELHPHSDVDLLFLFEGELSKAAETALSEFIAFLWDASLEIGHSVRTLS 116
           + L+AVGGYGRG L P SD+DLLFL   + +  AE+ +   +  LWD   ++GH+ RT+ 
Sbjct: 104 LCLLAVGGYGRGTLAPFSDIDLLFLRPYKQTPHAESVIEYMLYALWDLGFKVGHASRTIE 163

Query: 117 DTLNLGREDITIATNLLEARLLSGPETLFDQLYDAIRQSDFW-TSSQFFIAKRDEQTARH 175
           + + L +ED TI T++LEAR L+G E L + L    R      T +QF  AK  E+  R 
Sbjct: 164 ECVRLSKEDFTIRTSILEARRLTGDERLAEDLKKRFRDEVMKATGAQFVAAKLKERDDRQ 223

Query: 176 AKASA--FDLEPNIKSCPGGLRDIQTIAWVAMRHFGASRLEELVQYEFLEPAELEELLEC 233
           A+A A  + +EPN+K   GGLRD+ T+ W+A       R E++ + E     E +  +  
Sbjct: 224 ARAGASRYMVEPNVKEGKGGLRDLHTLMWIAEYLHPVDRPEDVFKMEVFSIRETKAFIRA 283

Query: 234 QHFLWKLRFALHMAVGRDENRLLFDVQRQVAELMGYEDATQL-AVEQMMKRYYRTVRRVM 292
             FL  +R  LH   GR E RL FD+Q ++A  MGY D     AVE+ M+RY+   + V 
Sbjct: 284 FDFLHAVRAHLHFTTGRPEERLTFDLQPEIARRMGYGDRGDAPAVERFMRRYFLIAKEVG 343

Query: 293 ELN-----EMLLQLFKRATLGQTKAL-----EIQAID-NNYQRRGAFIEALRDDLFDSGE 341
            L      ++  + FK    G ++ L     + +A+D   +   G  +     ++F++  
Sbjct: 344 TLTRAFSAKLEAEHFKNEPKGISRFLPGARPKRKALDVEGFYEDGGRLNIEGQEIFEADP 403

Query: 342 -EIVRLFVHVAKNSNIKGIYAPTLRSLRRARRAQQQPLQENPQCRQAFMEIL-KHPRGIA 399
             ++RLF  +A   ++  ++     ++ RA       ++ +P   +AF+++L +  R   
Sbjct: 404 VNLIRLF-KIADERDLD-LHPDAFTAVTRALPLITSRVRRDPDACRAFLDLLARGKRSYR 461

Query: 400 ALSLMHKHGVLSAYLPAWRNIEGQMQFDLFHAYTVDEHTHRLLLNIERFSQPEQKEEFPL 459
            L+LM+  GVL  ++P +  +  QMQF+++H+YTVDEHT R +  I   +     ++ PL
Sbjct: 462 TLTLMNDAGVLGRFIPEFGRVVAQMQFNMYHSYTVDEHTLRAVGVIGDIAAGRLVDDHPL 521

Query: 460 GSVLINQLPKKGLLVLGAIFHDIAKGRGGDHSKLGSSDALAFCKLHGLNDHDGRLVAWLV 519
              ++  +  +  L L  + HD  KG  G   K G+  A + C+  G+      LVAWLV
Sbjct: 522 AVSIMPLIEDREALFLAMLLHDTGKGGVGGQEKAGARSARSACERLGVERSKVELVAWLV 581

Query: 520 ENHLVMSVTAQRRDISDPDVVADFASKVRDAVHLSYLYCLTVADICATNEKTWNNWKGSL 579
           ENHLVMS  AQ+RD+SDP  VA FA  V +   L  L  +TVADI A     WN WKG L
Sbjct: 582 ENHLVMSDFAQKRDVSDPGTVAAFARIVENPERLRLLLVITVADIRAVGPGVWNGWKGQL 641

Query: 580 LRDLYFSTQRVLARGKEKPVDIRARVREYQAKAKKELLRRGVKEKELDTL-W-QRFKADY 637
           LR+LY +T+ V   G+    D  A V+ +Q ++  E  R  + E +     W    +  Y
Sbjct: 642 LRELYNATEAVFRGGRGS--DAAANVQRHQ-ESTAEAARAALLETDPAAKGWVAAMENAY 698

Query: 638 FLRHQPNQVAWHAEAILKHKQLDEPLVLVSKHTTRGGTELFVYCQDRPKLFATVMAVLDN 697
           F     + +  HAE   +                    E+ +  +DR  LFA +   + +
Sbjct: 699 FSAFSQDDLFHHAELARRAAIQGGAAAEGQVRPGSNAAEVVIAAKDRRGLFADLALAISS 758

Query: 698 KNINVHDANIMTSKDNYALDTFVILEQDGAP--VSQLSRIQSIRKALEKALASDNPKL-P 754
              NV  A + TS+   ALD F + +  GAP        ++ +  ALE A   D   + P
Sbjct: 759 LGGNVVGARVFTSRQGQALDVFYVQDVTGAPFGCENPRALRRLADALEAAGKGDALAVEP 818

Query: 755 RFRKLSRKMKPFNVPTQVSFLESNRHGTSMMELIALDTPGLLAKVGDIFYRCNTTLLAAK 814
           R      +   F +   V+      +  +++E    D PGLL  +         ++ +A 
Sbjct: 819 RRGSEQTRAAAFAIAPSVTIDNDASNDATVVEASGRDRPGLLHALAKTLADSALSIQSAH 878

Query: 815 ITTIGERAEDFFILQTNDGLQLNETQE-NTLKEALISAL 852
           I   GERA D F +QT +G ++ +T++ N LK  L++AL
Sbjct: 879 IDGYGERAVDAFYVQTTEGGKVTDTRKLNALKADLLAAL 917