Pairwise Alignments

Query, 826 a.a., surface antigen (D15) (RefSeq) from Shewanella sp. ANA-3

Subject, 786 a.a., outer membrane protein assembly factor from Pseudomonas putida KT2440

 Score =  595 bits (1534), Expect = e-174
 Identities = 327/822 (39%), Positives = 488/822 (59%), Gaps = 45/822 (5%)

Query: 11  LFVGASFSGTVLADTF-QPFEVTDIQVEGLQRVALGAALLSLPVKVGDTVDQLKIQQAIK 69
           L + A  S  ++A+   + F ++DI+V GLQRV+ G+   +LP+ VGD  D  ++  + +
Sbjct: 4   LLLTAVMSALMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGDQADDRRLVDSTR 63

Query: 70  SLYASTNFENISVSHDGGVLIVKVTERPTISAVTFEGNKDIKDEQLQESLDGSGVKVGES 129
           SL+ +  F++I +S DG VLI+ V ERP++S++  EGNK I  E L + L  SG+  GE 
Sbjct: 64  SLFKTGFFQDIQLSRDGNVLIINVVERPSVSSIEIEGNKAISTEDLMKGLKQSGLAEGEI 123

Query: 130 LDRTMLTGIEKGLQDFYYGVGKYGAKVEAQVINLPRNRVELKFKFTEGLAAEIRQINVVG 189
             R  L G+   LQ  Y   G+Y A+V+A+V+  PRNRV LK K  EG  A I+ IN+VG
Sbjct: 124 FQRATLEGVRNELQRQYVAQGRYSAEVDAEVVPQPRNRVALKIKINEGTVAAIQHINIVG 183

Query: 190 NKEFTDAELIGMLELKDYVAWWDLF-GERRYQKQKLQADLETIKTYYHNKGYIRFEVTST 248
           N  F D  L  + ELK    W   F  + +Y ++KL  DLE +++YY ++GYI  ++ ST
Sbjct: 184 NNVFDDETLGQLFELKT-TNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDIAST 242

Query: 249 QVAMTPDRKGLYITINVNEGEKYKVKDVNLTGDLMGREELMKSILPIKAGDMYNGGDVTF 308
           QV++TPD+K +YIT+N+NEGEKY V+DV L+GDL   E+ +KS+L ++ G +++   +T 
Sbjct: 243 QVSITPDKKHVYITVNINEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQPGQVFSRKVMTT 302

Query: 309 TEEMYSKYLGRFGYAYPEVKTYPEIDDKTKEVTLNINIKPGKRVYVRSVNFTGNTVTKDE 368
           T E+ ++ LG  GY +  V   P+ +D+   V +   + PGKR YV  +N+ GNT T+DE
Sbjct: 303 TSELITRRLGNEGYTFANVNGVPQPNDQDHTVDIMFVVDPGKRAYVNRINYRGNTKTEDE 362

Query: 369 VMRRELRQMEGAWLNSAQVEQSKARLNRLGFFETVDTETIQVPGTDDLVDVAVKVKEQPS 428
           V+RRE+RQMEG W ++  ++QSK RL RLGFF+ V+ ET QVPGTDD VDV   V+EQ S
Sbjct: 363 VLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVETPQVPGTDDQVDVNYSVEEQAS 422

Query: 429 GSFNAGVGYGTESGLSLQFGVQQNNFLGTGNQAGVSLSTNKYSKNVNLSYTDPYWTKDGV 488
           GS  A VG+   +GL L   + Q+NFLGTGN+  + L+ ++Y    N  + DPY+T DGV
Sbjct: 423 GSITASVGFAQSAGLILGGSISQSNFLGTGNKVSIGLTRSEYQTRYNFGFVDPYFTADGV 482

Query: 489 SLGGSVYW--NEFDANEANLERYKNSSYGVALNSGFPINEYNRINGGIGYRHNTISEISA 546
           SLG + ++   ++D  + ++  Y   SYG  ++ G+PI+E +R+  G+  + + I +   
Sbjct: 483 SLGYNAFYRSTDYDDLDVDVASYAVDSYGAGVSLGYPISETSRLTYGLSVQQDKI-KTGK 541

Query: 547 YEQALRFYNIYRDDDPNADLSFDNFELSLGWYRSTLNRGTFPTDGSSQRLSGKMTVPGSD 606
           Y     F  +  + D     +F NF+ S+GW  STLN+G   T G SQ L+ + TVPGSD
Sbjct: 542 YTVDEIFDFLEEEGD-----NFLNFKASIGWSESTLNKGVLATRGHSQSLTLESTVPGSD 596

Query: 607 LQYFKTDFDTNYYFPITRSHSFVLLARGRLGYGNGYGQFNDNDQILPFWENYYSGGSTSL 666
           L +FK D+    + PIT    + L     LGYG+GYG  +     LPF+ENY++GG  S+
Sbjct: 597 LSFFKLDYRGQLFKPIT--SDYTLRLHTELGYGDGYGSTSG----LPFYENYFAGGFNSV 650

Query: 667 RGFKSNSVGPRSFYLFRGSEPCAPDPSGDGCSLPGDPNSIQVSSGRSIGGNAIATASMEL 726
           RGFK +S+GPR       S P   + +G       DP+   +      GGN +     EL
Sbjct: 651 RGFKDSSLGPR-------STPSIGEAAGGKPGTIADPDQDPL----PFGGNVLVQGGAEL 699

Query: 727 IVPTPFLDEAYTNSVRTSFFVDAGNVWDTEFDFAKYQTLPAEEFDKLQDYSDPG--RIRA 784
           + P PF+ +    S+RTS F D GNV+DT                   D    G   + +
Sbjct: 700 LFPLPFVKD--QRSLRTSVFWDVGNVFDT-------------NCGNKPDCEKVGFSGMAS 744

Query: 785 SWGVSLQWLSPMGPMVFSLAWPIKEYEGDQTEIFSFNIGKTF 826
           S G+ + W++ +GP+ FSLA P+K+ +   T++F F++G+TF
Sbjct: 745 SVGLGVTWITALGPLSFSLAMPVKKPDDADTQVFQFSLGQTF 786