Pairwise Alignments

Query, 385 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) from Shewanella sp. ANA-3

Subject, 375 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas simiae WCS417

 Score =  338 bits (866), Expect = 2e-97
 Identities = 176/373 (47%), Positives = 248/373 (66%), Gaps = 3/373 (0%)

Query: 6   NEDQRQFADLARQFAADELAPFAAKWDEEHHFPKDVIQKAGELGFCSLYSPESEGGMGLS 65
           NE+Q Q +D ARQFA + L PFAA+WD EH FPK+ I +  ELGF  +  PE  GG    
Sbjct: 4   NEEQLQISDAARQFAQERLKPFAAEWDREHRFPKEAIGEMAELGFFGMLVPEQWGGCDTG 63

Query: 66  RLDASIIFEELSKGCTATTAMLTIHNMATWM-VTTWGTDTLRQAWSEPLTTGQMLASYCL 124
            L  ++  EE++ G  A + ++++HN    + V  +G D  ++ + +PL +G ML ++ L
Sbjct: 64  YLAYAMALEEIAAGDGACSTIMSVHNSVGCVPVLKFGNDQQKEQFLKPLASGAMLGAFAL 123

Query: 125 TEPGAGSDAASLQTKAVREGDEYVVSGSKMFISGAGSTELLVVMCRTGQA-GPKGISAIA 183
           TEP AGSDA+SL+T+A  EGD YV++G K FI+   +  +++V   T  A G +GISA  
Sbjct: 124 TEPQAGSDASSLKTRARLEGDHYVLNGCKQFITSGQNAGVVIVFAVTDPAAGKRGISAFI 183

Query: 184 IPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGEEGQGFTFAMKGLDGGRIN 243
           +P DS G    + EDK+G +A  T  + F++V+VPVAN LGEEG+G+  A+  L+GGR+ 
Sbjct: 184 VPTDSPGYSVARVEDKLGQHASDTCQILFEDVKVPVANRLGEEGEGYKIALANLEGGRVG 243

Query: 244 IATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQMVRLAAFK 303
           IA+ +VG A+AA E A  Y  ER+ FGKP+   QA+ F+LADMAT++  ARQMV  AA  
Sbjct: 244 IASQAVGMARAAFEAARDYARERESFGKPIIEHQAVAFRLADMATQIAVARQMVHYAAAL 303

Query: 304 LDSGDPEATAYCAMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRDVRVHQILEG 363
            DSG P A    +MAK FA+++  +VC AALQ  GGYGY+ ++PLER +RDVRV QI EG
Sbjct: 304 RDSGKP-ALVEASMAKLFASEMAEKVCSAALQTLGGYGYLSDFPLERIYRDVRVCQIYEG 362

Query: 364 TNEIMRLIIARRL 376
           T++I R++I+R L
Sbjct: 363 TSDIQRMVISRNL 375