Pairwise Alignments

Query, 385 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) from Shewanella sp. ANA-3

Subject, 375 a.a., short-chain acyl-CoA dehydrogenase from Pseudomonas putida KT2440

 Score =  331 bits (848), Expect = 2e-95
 Identities = 174/373 (46%), Positives = 246/373 (65%), Gaps = 3/373 (0%)

Query: 6   NEDQRQFADLARQFAADELAPFAAKWDEEHHFPKDVIQKAGELGFCSLYSPESEGGMGLS 65
           N++Q+Q AD  R FA + L PFA +WD++H FPK+ I +  ELG   +  PE  GG    
Sbjct: 4   NDEQQQIADAVRAFAQERLKPFAEQWDKDHRFPKEAIDEMAELGLFGMLVPEQWGGSDTG 63

Query: 66  RLDASIIFEELSKGCTATTAMLTIHNMATWM-VTTWGTDTLRQAWSEPLTTGQMLASYCL 124
            +  ++  EE++ G  A + ++++HN    + +  +G +  ++ +  PL TG ML ++ L
Sbjct: 64  YVAYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKEQFLTPLATGAMLGAFAL 123

Query: 125 TEPGAGSDAASLQTKAVREGDEYVVSGSKMFISGAGSTELLVVMCRTG-QAGPKGISAIA 183
           TEP AGSDA+SL+T+A  EGD YV++GSK FI+   +  +++V   T  +AG +GISA  
Sbjct: 124 TEPQAGSDASSLKTRARLEGDHYVLNGSKQFITSGQNAGVVIVFAVTDPEAGKRGISAFI 183

Query: 184 IPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGEEGQGFTFAMKGLDGGRIN 243
           +P DS G    + EDK+G +A  T  + FDNV+VPVAN LG EG+G+  A+  L+GGRI 
Sbjct: 184 VPTDSPGYQVARVEDKLGQHASDTCQIVFDNVQVPVANRLGAEGEGYKIALANLEGGRIG 243

Query: 244 IATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQMVRLAAFK 303
           IA+ +VG A+AA E A  Y NERQ FGKPL   QA+ F+LADMAT++  ARQMV  AA  
Sbjct: 244 IASQAVGMARAAFEVARDYANERQSFGKPLIEHQAVAFRLADMATKISVARQMVLHAAAL 303

Query: 304 LDSGDPEATAYCAMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRDVRVHQILEG 363
            D+G P A    +MAK FA+++  +VC  ALQ  GGYGY+ ++PLER +RDVRV QI EG
Sbjct: 304 RDAGRP-ALVEASMAKLFASEMAEKVCSDALQTLGGYGYLSDFPLERIYRDVRVCQIYEG 362

Query: 364 TNEIMRLIIARRL 376
           T++I R++IAR L
Sbjct: 363 TSDIQRMVIARNL 375