Pairwise Alignments

Query, 385 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) (from data) from Shewanella sp. ANA-3

Subject, 378 a.a., acyl-CoA dehydrogenase from Magnetospirillum magneticum AMB-1

 Score =  459 bits (1182), Expect = e-134
 Identities = 225/376 (59%), Positives = 277/376 (73%)

Query: 1   MDFNFNEDQRQFADLARQFAADELAPFAAKWDEEHHFPKDVIQKAGELGFCSLYSPESEG 60
           MDF    DQ  F   A  FA  E+AP AA WDEE  FP+D ++KA ELGF  +Y  E  G
Sbjct: 1   MDFGLTPDQEAFRQAAHDFAVGEMAPHAAHWDEEGIFPEDTLRKAAELGFAGIYVGEDVG 60

Query: 61  GMGLSRLDASIIFEELSKGCTATTAMLTIHNMATWMVTTWGTDTLRQAWSEPLTTGQMLA 120
           G  LSRLDA++IFEEL+  C +T A ++IHNMA WM+ ++G    R+ +   L + +  A
Sbjct: 61  GSALSRLDAALIFEELAAACPSTAAYISIHNMAAWMIDSFGDQEQRRRFLPDLCSMRKFA 120

Query: 121 SYCLTEPGAGSDAASLQTKAVREGDEYVVSGSKMFISGAGSTELLVVMCRTGQAGPKGIS 180
           SYCLTEP AGSDAASL+TKA R+GD YV++G+K FISG G +++ VVM RTG  GPKGIS
Sbjct: 121 SYCLTEPNAGSDAASLRTKAERDGDHYVLNGTKAFISGGGRSDVYVVMVRTGAPGPKGIS 180

Query: 181 AIAIPADSEGIIYGKAEDKMGWNAQPTRLVTFDNVRVPVANLLGEEGQGFTFAMKGLDGG 240
            + + A + G+ +GK E K+GW  QPT  V F++ RVPVAN +G EG GF  AMKGLDGG
Sbjct: 181 CLVVEAGTPGLSFGKQEKKLGWKTQPTASVIFEDCRVPVANRIGAEGDGFKIAMKGLDGG 240

Query: 241 RINIATCSVGTAQAALERATQYMNERQQFGKPLAAFQALQFKLADMATELVAARQMVRLA 300
           RINI  CS+G A+A LE A +Y  +RQQFG+ ++AFQA QFKLADMATEL AAR M+  A
Sbjct: 241 RINIGACSLGGARACLEHAIEYTGQRQQFGQAISAFQATQFKLADMATELEAARLMIHRA 300

Query: 301 AFKLDSGDPEATAYCAMAKRFATDVGFQVCDAALQIHGGYGYIREYPLERHFRDVRVHQI 360
           A  LDS  P+AT +CAMAKR ATDVGF V DAALQ+HGGYGYI+EYP+ER+FRD+RVHQI
Sbjct: 301 AHSLDSKSPQATVHCAMAKRMATDVGFAVTDAALQLHGGYGYIKEYPIERYFRDLRVHQI 360

Query: 361 LEGTNEIMRLIIARRL 376
           LEG+NEIMR+II R L
Sbjct: 361 LEGSNEIMRVIIGRAL 376