Pairwise Alignments

Query, 241 a.a., RNA methyltransferase (RefSeq) from Shewanella sp. ANA-3

Subject, 248 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Dickeya dadantii 3937

 Score =  289 bits (739), Expect = 4e-83
 Identities = 151/237 (63%), Positives = 180/237 (75%), Gaps = 3/237 (1%)

Query: 1   MLSNIRVILVGTSHPGNIGSTARAMKTMGLSTLYLAEPRCEVDGQSIALAAGASDILKHL 60
           ML NIR++LV TSH GN+GSTARAMKTMGL+ L+L  P  + D Q+I+L+AGASD++ + 
Sbjct: 1   MLQNIRIVLVETSHTGNMGSTARAMKTMGLTNLWLVNPLVKPDSQAISLSAGASDVIGNA 60

Query: 61  VKVDSLEEAIADCSLVIATSARSRTLDWPMLDPREAGQKLVTEGLTGPVAIVFGRENHGL 120
             VDSL++A+  C LV+ TSARSRTL WPML+PRE G + V E    PVA+VFGRE  GL
Sbjct: 61  TIVDSLDQALEGCGLVVGTSARSRTLPWPMLEPRECGVRSVQEAQHAPVALVFGRERVGL 120

Query: 121 TNEELQQCTYHVAIPANPEYSSLNLAQAVQIICYETRVAHL---AQTEAPQVEEEYPLSA 177
           TNEELQ+C YHVAIPANPEYSSLNLA AVQI+ YE RVA L    + E    E  YPL  
Sbjct: 121 TNEELQKCHYHVAIPANPEYSSLNLAMAVQILSYEVRVAWLDRQQRGEPAHEESPYPLVD 180

Query: 178 DLERFFVHLESTLSSTGFIIKNHPGQVMTKLRRLFSRARIESQEMNILRGILTSIDK 234
           DLERF+ HLE TL  TGFI + H GQVM KLRRLF+RAR E+QE+NILRGIL++I K
Sbjct: 181 DLERFYQHLEETLLHTGFIRQPHQGQVMNKLRRLFTRARPENQELNILRGILSAITK 237