Pairwise Alignments

Query, 219 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 231 a.a., Integral membrane protein, interacts with FtsH from Variovorax sp. SCN45

 Score =  123 bits (308), Expect = 3e-33
 Identities = 72/216 (33%), Positives = 120/216 (55%), Gaps = 7/216 (3%)

Query: 11  ASTLEVNKLLKNTYLLLAMTLAFSALCAGLAMALNISPLMSLGLSI-----GGLVLLFVT 65
           AS  E N++L+NTY LLA+++  + L A + ++   S  MS G+ +     G    ++  
Sbjct: 16  ASPQERNRVLRNTYWLLALSMVPTVLGAWIGVSTGFSRAMSPGIGLMVFLGGAFGFMYAI 75

Query: 66  LRKADSAAGIFWVFAFTGMEGASLGYMLNHYAGMTNGSELIMQALGLTSVIFIALSAYAV 125
            +  +SAAG+  + AFT   G  L  ++    G+ NG+ L+M A   T  IF+ ++  + 
Sbjct: 76  EKTKESAAGVPVLLAFTFFMGLMLSRLVGTVLGLQNGASLVMTAFAGTGAIFLGMATLSS 135

Query: 126 TTKKDFSFLRGFLFAGLIVVIAAALINIFVGNSVAFMAINAGLALLMTGFILFDTSRIVN 185
             K+D S +  +LF G I+++ A + N F+ +S   M ++     + + FIL D  R+ +
Sbjct: 136 VIKRDLSGMGKWLFIGAILLLVAGIANFFLKSSALMMTLSVLAIGIFSAFILHDLKRVKD 195

Query: 186 GGETNYIRATISLYLDFLNLFIAILHLLGI--GNDD 219
           G ETNYI AT+ +YL   N+F ++L LLGI  G D+
Sbjct: 196 GLETNYISATLGVYLSIYNVFQSLLALLGIAGGRDE 231