Pairwise Alignments

Query, 658 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella sp. ANA-3

Subject, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas simiae WCS417

 Score =  248 bits (634), Expect = 5e-70
 Identities = 134/320 (41%), Positives = 198/320 (61%), Gaps = 5/320 (1%)

Query: 17  LLQQQFGFDGFRQGQHEVVSQLLSGHSSLAIFPTGSGKSLCYQFTALQLPHLTLVVSPLL 76
           +L+  FG+D FR  Q  ++ ++ SG  +L + PTG GKSLC+Q  AL    L +VVSPL+
Sbjct: 8   VLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVSPLI 67

Query: 77  ALIKDQLSFLHEKGIKAASIDSTLTPELTQQVMRDARYGELKLLMVSVERFKNERFRQFI 136
           AL+ DQ++ L E G+ AAS++STL+ E  + +    + GE+K+L ++ ER    R   F+
Sbjct: 68  ALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQPRMLAFL 127

Query: 137 QSIPISMLVVDEAHCISEWGHNFRPDYLKLPDYRRELAIPLVLLLTATATRKVKLDMAAR 196
           QS+ I++  +DEAHC+S+WGH+FR +YL+L            + LTATA ++ + ++  R
Sbjct: 128 QSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREEIVER 187

Query: 197 FDIKPQHIVQTGFYRSNLDLTVLPVASQHK--LTALQQQLNLFTGTGIVYVTLQHTAEDV 254
             ++      + F RSN+   ++P     K  L  L ++    +  GIVY   +   ++V
Sbjct: 188 LHLQNAERFLSSFDRSNIFYRIVPKEQPRKQLLAFLSERR---SDAGIVYCLSRKKVDEV 244

Query: 255 AAKLCQMGFDASAYHAGFEDEKRQQIQQDFMQGKIRIVVATIAFGMGIDKSNIRFVVHYD 314
           AA LC+ G+ A  YHAG  ++ R   Q+ F+  +  I+VATIAFGMGIDKSN+RFV H D
Sbjct: 245 AAFLCEQGYPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFVAHMD 304

Query: 315 LPKSIENYCQEIGRAGRDGL 334
           LPKS+E Y QE GRAGRDGL
Sbjct: 305 LPKSLEAYYQETGRAGRDGL 324



 Score = 32.7 bits (73), Expect = 6e-05
 Identities = 25/101 (24%), Positives = 37/101 (36%), Gaps = 15/101 (14%)

Query: 507 LAQGHLADELHQYFTDKEAKEVARIAQLVRFFELTTCLNYNLARYFDDNAAPQSCGHCSV 566
           + Q    DE H+        E  ++  ++   E T C    L  YFD++  P+ CGHC  
Sbjct: 343 MLQNSEGDERHKRL------EQHKLDAMLSLCEETRCRRQTLLAYFDEDM-PEPCGHCDN 395

Query: 567 CRGQLAKLAYSEVPKWPDDAQLKADLHELKRTAGSKGLASL 607
           C           V  W      +  L  + RT    G+  L
Sbjct: 396 C--------VDGVQTWDATEPARQGLSAIYRTGQRYGVGHL 428