Pairwise Alignments

Query, 658 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella sp. ANA-3

Subject, 715 a.a., ATP-dependent DNA 3 from Pseudomonas putida KT2440

 Score =  249 bits (637), Expect = 2e-70
 Identities = 137/325 (42%), Positives = 193/325 (59%), Gaps = 11/325 (3%)

Query: 17  LLQQQFGFDGFRQGQHEVVSQLLSGHSSLAIFPTGSGKSLCYQFTALQLPHLTLVVSPLL 76
           +L+  FG+D FR  Q  ++  + +G  +L + PTG GKSLC+Q   L  P LT+VVSPL+
Sbjct: 8   VLKDIFGYDSFRGRQAAIIECVANGGDALVLMPTGGGKSLCFQVPGLLRPGLTVVVSPLI 67

Query: 77  ALIKDQLSFLHEKGIKAASIDSTLTPELTQQVMRDARYGELKLLMVSVERFKNERFRQFI 136
           AL+ DQ++ L E G+ AA+++STLT E  +++    R GE+K+L ++ ER    R   F+
Sbjct: 68  ALMDDQVATLDELGVSAAALNSTLTAEQQRELAGRLRRGEVKMLYLAPERLVQPRMLDFL 127

Query: 137 QSIPISMLVVDEAHCISEWGHNFRPDYLKLPDYRRELAIPLVLLLTATATRKVKLDMAAR 196
           + + IS+  +DEAHC+S+WGH+FRP+YL+L            + LTATA  + + ++  R
Sbjct: 128 RDLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPHVPRIALTATADMRTREEIVQR 187

Query: 197 FDIKPQHIVQTGFYRSNLDLTVLPVASQHKLTALQQQLNLFTG-----TGIVYVTLQHTA 251
             ++      + F R N+   ++P  +  K      QL  F G      GIVY   +   
Sbjct: 188 LHLQGAERFLSSFDRPNIFYRIVPKEAPRK------QLMAFLGERRGNAGIVYCLSRKKV 241

Query: 252 EDVAAKLCQMGFDASAYHAGFEDEKRQQIQQDFMQGKIRIVVATIAFGMGIDKSNIRFVV 311
           ++ AA LC  GF A  YHAG   E R   Q  F+  +  I+VATIAFGMGIDK N+RFV 
Sbjct: 242 DETAAFLCSQGFPALPYHAGLAAETRAANQHRFLNEEGLIMVATIAFGMGIDKPNVRFVA 301

Query: 312 HYDLPKSIENYCQEIGRAGRDGLLS 336
           H DLPKS+E Y QE GRAGRDGL S
Sbjct: 302 HLDLPKSLEAYYQETGRAGRDGLPS 326



 Score = 30.0 bits (66), Expect = 4e-04
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 7/61 (11%)

Query: 507 LAQGHLADELHQYFTDKEAKEVARIAQLVRFFELTTCLNYNLARYFDDNAAPQSCGHCSV 566
           + Q    DE H+        E  ++  ++   E T C   +L  YFD+    Q CGHC  
Sbjct: 343 MLQNSEGDERHKRI------EQHKLDAMLALCEETRCRRQSLLAYFDE-ILEQPCGHCDN 395

Query: 567 C 567
           C
Sbjct: 396 C 396