Pairwise Alignments

Query, 658 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella sp. ANA-3

Subject, 637 a.a., ATP-dependent DNA helicase RecQ from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  235 bits (600), Expect = 4e-66
 Identities = 141/332 (42%), Positives = 198/332 (59%), Gaps = 18/332 (5%)

Query: 17  LLQQQFGFDGFRQGQHEVVSQLLSGHSSLAIFPTGSGKSLCYQFTALQLPH----LTLVV 72
           +L + FG+D FR  Q ++VS + +G  +L + PTG GKSLCYQ  A+        LT+VV
Sbjct: 21  VLHEVFGYDAFRGPQADIVSHVGAGGDALVLMPTGGGKSLCYQVPAIVRERTGQGLTVVV 80

Query: 73  SPLLALIKDQLSFLHEKGIKAASIDSTLTPELTQQVMRDARYGELKLLMVSVERFKNERF 132
           SPL+AL+ DQ+  L E G+ AA ++S+L+ E  QQV +    GEL LL  + ER    RF
Sbjct: 81  SPLIALMHDQVGALIEAGVAAAFLNSSLSLEDAQQVEKQMLRGELTLLYAAPERLTTPRF 140

Query: 133 RQFIQSI----PISMLVVDEAHCISEWGHNFRPDYLKLPD-YRRELAIPLVLLLTATATR 187
              + S+     +S+  +DEAHC+S+WGH+FRP+Y  L   + R   +P V L TATA  
Sbjct: 141 LALLDSLHERGKLSLFAIDEAHCVSQWGHDFRPEYRALVVLHERYAGVPRVAL-TATADD 199

Query: 188 KVKLDMAARFDIKPQHIVQTGFYRSNLDLTVLPVASQHKLTALQQQL-NLFTGT-----G 241
             + D+  R  ++      + F R N+   +  V  +   T LQ+ + +  TG      G
Sbjct: 200 LTRADIVERLQLQEARTFISSFDRPNIRYQL--VEKKDATTQLQRFIRDEHTGADGHDAG 257

Query: 242 IVYVTLQHTAEDVAAKLCQMGFDASAYHAGFEDEKRQQIQQDFMQGKIRIVVATIAFGMG 301
           IVY   +   E+VAA LC+ GF+A  YHAG +   RQ+ Q  F++ +  I+VATIAFGMG
Sbjct: 258 IVYCQSRRRVEEVAAMLCEAGFNALPYHAGLDAAVRQRHQDRFLREEGLIMVATIAFGMG 317

Query: 302 IDKSNIRFVVHYDLPKSIENYCQEIGRAGRDG 333
           IDK ++RFV H D+PK+IE Y QE GRAGRDG
Sbjct: 318 IDKPDVRFVAHLDMPKNIEGYYQETGRAGRDG 349