Pairwise Alignments

Query, 173 a.a., Holliday junction resolvase (RefSeq) from Shewanella sp. ANA-3

Subject, 182 a.a., Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  154 bits (390), Expect = 6e-43
 Identities = 84/175 (48%), Positives = 115/175 (65%), Gaps = 5/175 (2%)

Query: 4   ILGVDPGSRITGYGVIQCLGRQQLYLGSGCIRTSGED---LPLRLKQIFDGISEIIRQYQ 60
           ILG+DPG + TG+GVI   G    Y+ SG I+TS +D   LP RLK +FDGI+E++ +YQ
Sbjct: 3   ILGIDPGLQCTGFGVIDTEGAALHYVASGTIQTSPKDGALLPERLKILFDGITEVVARYQ 62

Query: 61  PDEFAIERVFLAKNADSALKLGQARGAAIVAATVANLPVAEYSATQIKNAVVGTGRAKKE 120
           P     E VF+  N  + L LGQARGA + A     L VAEY+A Q+K AV G+GRA K 
Sbjct: 63  PQVSVCEIVFVNVNPQATLLLGQARGACLTALVANQLEVAEYTALQLKKAVAGSGRAGKP 122

Query: 121 QVQHMIQQLLKLPAAPQADAADALGVAVCHYHTNQSLVALSGRAT--TRTYGRYR 173
           Q+Q M+++LL+LP  P  DAADALG+A+ H   +++L A+S  +T   RT+  Y+
Sbjct: 123 QMQEMVKRLLRLPGLPGKDAADALGLAITHAQVSRTLAAISKVSTQQARTHAAYK 177