Pairwise Alignments

Query, 292 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

Subject, 305 a.a., DNA-binding transcriptional regulator OxyR from Escherichia coli ECRC62

 Score =  100 bits (249), Expect = 4e-26
 Identities = 73/244 (29%), Positives = 116/244 (47%), Gaps = 5/244 (2%)

Query: 1   MNIRHLHYFQQLAQLQHFAKAANACHVTQPTLSAGISALEKSLGTELVVRGSQFVALTDA 60
           MNIR L Y   LA+ +HF +AA++CHV+QPTLS  I  LE  LG  L+ R S+ V  T A
Sbjct: 1   MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA 60

Query: 61  GQIMLQYAERMLQEQAALKQELSLFRGQLTGSLRIGIVPQSSIDIMP-LIKLFNQAYPNI 119
           G +++  A  +L+E   LK+  S     ++G L IG++P     ++P +I + +Q +P +
Sbjct: 61  GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL 120

Query: 120 SIKLSVMTNGQLIESLSLHKTDIGLGFDEQLTEANRRSFVFYPQRANQMALLSCDSVDDS 179
            + L      QL+  L   K D  +    + +EA    F+  P     M L   +    +
Sbjct: 121 EMYLHEAQTHQLLAQLDSGKLDCVILALVKESEA----FIEVPLFDEPMLLAIYEDHPWA 176

Query: 180 ASKCLSLYDIGTRPLVLLSQNMQFRKYIDNAMAQAGIDFNLVLETDSLFHLIGAVKHGLG 239
             +C+ + D+    L++L      R        +AG D +      SL  L   V  G G
Sbjct: 177 NRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSG 236

Query: 240 SAIV 243
             ++
Sbjct: 237 ITLL 240