Pairwise Alignments

Query, 680 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 629 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  337 bits (865), Expect = 8e-97
 Identities = 245/705 (34%), Positives = 351/705 (49%), Gaps = 103/705 (14%)

Query: 1   MKIVKKSFNKSALALGVASALSLLMVSNVNAVAFDWGEIQGTFDSTWTAGASWRVGERDW 60
           M  V + + ++ L L V+ A SL        V+F+ GEI+G FDS+ + GASW       
Sbjct: 1   MTSVNQFWRRAKLPLAVSLASSL--AGPAFGVSFNVGEIEGQFDSSLSIGASW------- 51

Query: 61  DGQIGKVNQPQFDWSNYSAFGNTKYTSAEIWAQPGSYSSNNDLSNLLYSQGDTTSEIVKG 120
                    P  +    +  G                S  +D  +  +  G+T S+I KG
Sbjct: 52  -----STQSPNKNLIGVNNGGR-------------GLSQTSDDGHANFKSGETFSKIFKG 93

Query: 121 LHELSLKYENYGLFVRGMYFYDRKLNDGNYDYNDPLTGKEYDPCRDSKASEVQCKDIRLL 180
           +H+L LKY + G+FVRG Y+YD +L D + ++ D       +  + S          ++L
Sbjct: 94  IHDLELKYGDTGVFVRGKYWYDFELKDESREFKDISDSNRKEGAKSSGG--------QIL 145

Query: 181 DAFVYANFDLNDGANPLSIRVGNQVVSWGESTLIAHGIGEINPVDLNILNAPGAELKEAF 240
           DAFVY N+ + D   P S+R+G QVVSWGEST I  GI  INP+D++    PGAE+KE  
Sbjct: 146 DAFVYHNYAIAD--QPGSVRLGKQVVSWGESTFIGGGINSINPIDVSAFRRPGAEIKEGL 203

Query: 241 RPQGMVWASLGITENLSVEGFYQYDWEPVWIPTPGSIFATNDFAGYGGYNQNAQLGFNAN 300
            P  M + S  +T+NLS E FYQ +W+   +   G+ F+  D    G             
Sbjct: 204 IPVNMFYVSQSLTDNLSAEAFYQLEWDQTVVDNCGTFFSQPDIVADG------------- 250

Query: 301 PDINLDFLTQEYQKLAGMIASGQTIPTQQLVAMALAYPTKVTLVQ--DEQAPSNGGQYGI 358
            D NL  L +  Q  A  IA G       L A  +    +  LV+   ++   + GQ+G 
Sbjct: 251 CDSNLRVLNKRSQIPA--IALG------PLAANGVNVDQEGVLVRRGPDRDARDSGQWGA 302

Query: 359 KLGYYAPELGDTEFGFYFMNYHSRRPLISGTAADFSTGALLSDLAVLGQNAGDINRELLL 418
            L Y    L DTEFG YFMNYHSR P+ S T A  S     + L       G       L
Sbjct: 303 SLKYMFEPL-DTEFGAYFMNYHSRAPIFSATGAPQSVYNTAAGL------PGPFAALAPL 355

Query: 419 SLKSFSKAQIVYPEDIKLYGFSFNTSL-GDTSVGAEIAHRQDEPLQIDDVELLFAGMPQQ 477
            +   S   I YPEDI+LYG SF+T+L   T+   EI++R + P+Q++  ++LFAG+ + 
Sbjct: 356 LVAGNSNYFIEYPEDIRLYGLSFSTTLPTGTAWSGEISYRPNAPVQLNSTDILFAGV-RP 414

Query: 478 LANAGIRPDFDGISQIDGVQPGETVDGFVRLDTTQAQVTFTHLFGPTLGLDNLTMLAEVG 537
           L  A         S + GV PG+ + G+ R + TQ Q TFTH F   +G   LT++ EVG
Sbjct: 415 LGGA-----LTNASLLTGV-PGQDLHGYERKEITQIQTTFTHFFDQVMGASRLTLVGEVG 468

Query: 538 GVWIHDMPGFDELR-----LNGPGTARSGGNPDMPGIIQALHN------GP--------- 577
             ++  +    + R     + GPG   + G  D    I  L+N      GP         
Sbjct: 469 ATYVGGLESRSDKRYGRDPVYGPGELPATGGIDTCANI--LNNSTINGAGPGSPQNNRSR 526

Query: 578 --ETNPFPTDFAWGYRLVAKADFNNLFAGVNMSPRLIFSHDVDGITPDPMFLFTEGRKSV 635
             E + F T  +WGYR  A  ++N++FAGVN+ P + +SHDV G +P P   F EGRK+V
Sbjct: 527 NCENDGFTTSMSWGYRGRAIWEYNDVFAGVNLKPNVAWSHDVSGYSPGPGGNFEEGRKAV 586

Query: 636 ALGVNFEYQNRWGADLSYNNFFGGVGTTNAMSDRDYI--SFNIKY 678
           +LGV+ EYQN + A L+Y NFF G  TT  + DRD++  SF + +
Sbjct: 587 SLGVDAEYQNTYTASLAYTNFFDGKYTT--VDDRDFVALSFGVNF 629