Pairwise Alignments
Query, 878 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3
Subject, 546 a.a., putative paraquat-inducible protein B (pqiB like) from Pseudomonas putida KT2440
Score = 178 bits (451), Expect = 9e-49
Identities = 108/304 (35%), Positives = 161/304 (52%), Gaps = 11/304 (3%)
Query: 16 SPIWLLPIVALALGAWLGIKSIKESGIEIQIHFPSATGIDVGKTLVKYQGLTVGKVKDIG 75
S +W++PI+A+ +GA L +++ + G I I F S G+ KT VKY+ + +G+V +
Sbjct: 24 SLVWIVPILAILIGASLVVRNWMQQGPVITISFHSGEGLVAHKTQVKYRSVVIGEVTTVD 83
Query: 76 IDEDLKGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDALFSGNYIAIQPGKGN 135
+ +D K V KV + A+ F + FW+V P+ + GV G+D L SG++I G+
Sbjct: 84 LADDKKSVVAKVQLSNDARSFATRGARFWVVRPRIGVGGVSGVDTLLSGSFIGADSGESK 143
Query: 136 A-ATFFEAERQPPPMQIGTEGVMIELTADKLGSLDVGSPVFFRQIPVGSVVSYRL-DGNA 193
F PPP+ +G L A LGSLD+GS +++R+IPVG VVS+ L D
Sbjct: 144 VPEKSFVGLELPPPITYDEKGKRFVLVASDLGSLDIGSSIYYRKIPVGEVVSFALQDDGK 203
Query: 194 RVIISAFIQEQYARLVKKNSHFWNVSGVKVDASLAGIKVNTESLASILAGGVSFSSDDKA 253
V I F+Q Y V ++ FWN SG+ + G+KV+TESL+SIL GG++F S D A
Sbjct: 204 GVEIGVFVQAPYDTFVTADTRFWNASGIDMQIGANGLKVDTESLSSILVGGLAFGSPDFA 263
Query: 254 ----PAAQNG--DSFALYDSETSALGGIEVSLTMNDGNA---IDKGTRIVYRGITIGTLQ 304
PAA FA D S G L + A + G + ++G+ G +
Sbjct: 264 AQAEPAADQARFQLFADRDMALSPPHGQAQYLQLRFDQAMRGLSVGAPVEFKGVEFGRVT 323
Query: 305 SKQL 308
S QL
Sbjct: 324 SIQL 327
Score = 99.4 bits (246), Expect = 5e-25
Identities = 59/204 (28%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 646 LAAKAAIRYQGHQVGEVTQVKLNTDLTTLTATAYLYGDYAEHFSRSDTEYHMVDAQISLA 705
+A K ++Y+ +GEVT V L D ++ A L D A F+ + +V +I +
Sbjct: 63 VAHKTQVKYRSVVIGEVTTVDLADDKKSVVAKVQLSND-ARSFATRGARFWVVRPRIGVG 121
Query: 706 GIKAPETLITGPYIGVLPGKSNQKATHFQAKLVESSYANVA--------EDALKFTLEDS 757
G+ +TL++G +IG G+S K+ E S+ + E +F L S
Sbjct: 122 GVSGVDTLLSGSFIGADSGES---------KVPEKSFVGLELPPPITYDEKGKRFVLVAS 172
Query: 758 NLGSMKVGTPIFFRGIKVGQIDGYSLSSQGNSVLMQAHIEPQYSHLVNQSSQFWDASGIK 817
+LGS+ +G+ I++R I VG++ ++L G V + ++ Y V ++FW+ASGI
Sbjct: 173 DLGSLDIGSSIYYRKIPVGEVVSFALQDDGKGVEIGVFVQAPYDTFVTADTRFWNASGID 232
Query: 818 VDVGIFSGAQIEAGSLETLLAGGI 841
+ +G +G +++ SL ++L GG+
Sbjct: 233 MQIGA-NGLKVDTESLSSILVGGL 255
Score = 79.3 bits (194), Expect = 6e-19
Identities = 67/301 (22%), Positives = 130/301 (43%), Gaps = 15/301 (4%)
Query: 275 IEVSLTMNDGNAIDKGTRIVYRGITIGTLQSKQLTATGVTAVAKFE--PEYANLLTSDGL 332
I +S +G K T++ YR + IG + + L + VAK + + + T
Sbjct: 52 ITISFHSGEGLVAHK-TQVKYRSVVIGEVTTVDLADDKKSVVAKVQLSNDARSFATRGAR 110
Query: 333 FWLEGADISLSGIKNPERLLTGSVINFLPGTNANTALP--SSFALQESAPDLLKAKKRQL 390
FW+ I + G+ + LL+GS F+ + + +P S L+ P K ++
Sbjct: 111 FWVVRPRIGVGGVSGVDTLLSGS---FIGADSGESKVPEKSFVGLELPPPITYDEKGKRF 167
Query: 391 TITSTENMGLTAGAEVRYKQLSIGEVLAVRLTKDLSAVEYQLELQPEFASLVRSDSYFIP 450
+ +++ L G+ + Y+++ +GEV++ L D VE + +Q + + V +D+ F
Sbjct: 168 VLVASDLGSLDIGSSIYYRKIPVGEVVSFALQDDGKGVEIGVFVQAPYDTFVTADTRFWN 227
Query: 451 ESALSIDASLDGVSVKTRDMATLTKGAVSLIPGSSD-----TPLAANTRLSLFSSIDEAK 505
S + + +G+ V T ++++ G ++ GS D P A R LF+ D A
Sbjct: 228 ASGIDMQIGANGLKVDTESLSSILVGGLAF--GSPDFAAQAEPAADQARFQLFADRDMAL 285
Query: 506 QFFARQQRLYFTLSSVDGADVSQGSPIYYKKMQIGSVESVNWQSKTEDFAIKIAIDKQFQ 565
Q + +S G+P+ +K ++ G V S+ + + +D
Sbjct: 286 SPPHGQAQYLQLRFDQAMRGLSVGAPVEFKGVEFGRVTSIQLDYDATRQSFPVVVDAVIY 345
Query: 566 P 566
P
Sbjct: 346 P 346
Score = 79.0 bits (193), Expect = 7e-19
Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 26/295 (8%)
Query: 390 LTITSTENMGLTAG-AEVRYKQLSIGEVLAVRLTKDLSAVEYQLELQPEFASL-VRSDSY 447
+TI+ GL A +V+Y+ + IGEV V L D +V +++L + S R +
Sbjct: 52 ITISFHSGEGLVAHKTQVKYRSVVIGEVTTVDLADDKKSVVAKVQLSNDARSFATRGARF 111
Query: 448 FIPESALSIDASLDGVSVKTRDMATLTKGA-VSLIPGSSDTPLAANTRLSLFSSIDEAKQ 506
++ + + GVS + TL G+ + G S P + L L I
Sbjct: 112 WVVRPRIGV----GGVS----GVDTLLSGSFIGADSGESKVPEKSFVGLELPPPI----T 159
Query: 507 FFARQQRLYFTLSSVDGADVSQGSPIYYKKMQIGSVESVNWQSKTEDFAIKIAIDKQFQP 566
+ + +R S + D+ GS IYY+K+ +G V S Q + I + + +
Sbjct: 160 YDEKGKRFVLVASDLGSLDI--GSSIYYRKIPVGEVVSFALQDDGKGVEIGVFVQAPYDT 217
Query: 567 LVQKPKVFWRNSAVDVSASLAGIDVAVAPLQGALKGSISLGLLD-SSTAEP---NAALKL 622
V FW S +D+ G+ V L L G ++ G D ++ AEP A +L
Sbjct: 218 FVTADTRFWNASGIDMQIGANGLKVDTESLSSILVGGLAFGSPDFAAQAEPAADQARFQL 277
Query: 623 YESKQLALA----QAQAIKLTLPASAK-LAAKAAIRYQGHQVGEVTQVKLNTDLT 672
+ + +AL+ QAQ ++L + + L+ A + ++G + G VT ++L+ D T
Sbjct: 278 FADRDMALSPPHGQAQYLQLRFDQAMRGLSVGAPVEFKGVEFGRVTSIQLDYDAT 332
Score = 43.9 bits (102), Expect = 3e-08
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 22/172 (12%)
Query: 54 IDVGKTLVKYQGLTVGKVKDIGIDEDLKGVNVKVMMDYRAKPFLNKETLFWLVTPKASIT 113
+D+G ++ Y+ + VG+V + +D KGV + V + F+ +T FW +
Sbjct: 177 LDIGSSIY-YRKIPVGEVVSFALQDDGKGVEIGVFVQAPYDTFVTADTRFWNASGIDMQI 235
Query: 114 GVEGLDALFSGNYIAIQPGKGNAATFFEAERQPPPMQIGTE---------------GVMI 158
G GL + G + F A+ +P Q + +
Sbjct: 236 GANGLKVDTESLSSILVGGLAFGSPDFAAQAEPAADQARFQLFADRDMALSPPHGQAQYL 295
Query: 159 ELTADK-LGSLDVGSPVFFRQIPVGSVVSYRLDGNAR-----VIISAFIQEQ 204
+L D+ + L VG+PV F+ + G V S +LD +A V++ A I Q
Sbjct: 296 QLRFDQAMRGLSVGAPVEFKGVEFGRVTSIQLDYDATRQSFPVVVDAVIYPQ 347
Score = 42.7 bits (99), Expect = 6e-08
Identities = 62/310 (20%), Positives = 115/310 (37%), Gaps = 30/310 (9%)
Query: 511 QQRLYFTLSSVDGAD-VSQGSPIYYKKMQIGSVESVNWQSKTEDFAIKIAIDKQFQPLVQ 569
QQ T+S G V+ + + Y+ + IG V +V+ + K+ + +
Sbjct: 47 QQGPVITISFHSGEGLVAHKTQVKYRSVVIGEVTTVDLADDKKSVVAKVQLSNDARSFAT 106
Query: 570 KPKVFWRNSAVDVSASLAGIDVAVAPLQGALKGSISLGLLDSSTAEPNAALKLYESKQLA 629
+ FW V + G+ L G+ G+ S + P + E
Sbjct: 107 RGARFW---VVRPRIGVGGVSGVDTLLSGSFIGADS-----GESKVPEKSFVGLELPPPI 158
Query: 630 LAQAQAIKLTLPAS--AKLAAKAAIRYQGHQVGEVTQVKLNTDLTTLTATAYLYGDYAEH 687
+ + L AS L ++I Y+ VGEV L D + ++ Y +
Sbjct: 159 TYDEKGKRFVLVASDLGSLDIGSSIYYRKIPVGEVVSFALQDDGKGVEIGVFVQAPY-DT 217
Query: 688 FSRSDTEYHM---VDAQISLAGIKAPETLITGPYIGVLPGKSNQKATHFQAKLVESSYAN 744
F +DT + +D QI G+K ++ +G L S A + ++ +
Sbjct: 218 FVTADTRFWNASGIDMQIGANGLKVDTESLSSILVGGLAFGSPDFAAQAEPAADQARFQL 277
Query: 745 VAEDALKFTLE-----------DSNLGSMKVGTPIFFRGIKVGQIDG----YSLSSQGNS 789
A+ + + D + + VG P+ F+G++ G++ Y + Q
Sbjct: 278 FADRDMALSPPHGQAQYLQLRFDQAMRGLSVGAPVEFKGVEFGRVTSIQLDYDATRQSFP 337
Query: 790 VLMQAHIEPQ 799
V++ A I PQ
Sbjct: 338 VVVDAVIYPQ 347