Pairwise Alignments
Query, 878 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3
Subject, 535 a.a., MCE family protein from Magnetospirillum magneticum AMB-1
Score = 180 bits (457), Expect = 2e-49
Identities = 112/299 (37%), Positives = 167/299 (55%), Gaps = 16/299 (5%)
Query: 11 KKKLFSPIWLLPIVALALGAWLGIKSIKESGIEIQIHFPSATGIDVGKTLVKYQGLTVGK 70
++ L S IW++P +A L I ++ + G I ++F SA GI+ GKT VK++ + +G
Sbjct: 21 RRWLPSAIWIIPALAALFALSLVIHALNQRGPAITVYFASAQGIEAGKTKVKFKDVEIGD 80
Query: 71 VKDIGIDEDLKGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDALFSGNYIAIQ 130
V ++ + D V V++ + A+ F +++ FW+V P+ + +GV GL+ L SG+YI +
Sbjct: 81 VTELHLAPDRTRVQVRIELKKEAEGFAVEDSRFWVVRPRMAGSGVSGLETLLSGSYIGVD 140
Query: 131 PGKGN-AATFFEAERQPPPMQIGTEGVMIELTADKLGSLDVGSPVFFRQIPVGSVVSYRL 189
G + +T F PP + G L A +GSLDVGSPVFFR+IPVG + SY L
Sbjct: 141 GGHSDKKSTEFTGLEVPPVIASDMPGRRFVLVARDIGSLDVGSPVFFRRIPVGHIESYAL 200
Query: 190 --DGNARVIISAFIQEQYARLVKKNSHFWNVSGVKVDASLAGIKVNTESLASILAGGVSF 247
DG++ + +SAF++ Y R V + FW+ SGV + G+K+NT+SLA++L GGV+F
Sbjct: 201 QPDGHS-LFLSAFVKAPYDRFVTDGTRFWHASGVDLRLDAGGLKLNTQSLAAMLLGGVAF 259
Query: 248 SSDD---KAPAAQNGDSFALYDSETSALGGIEVSLTMNDGNAIDKGTRI--VYRGITIG 301
S D +AP A FAL SA L DG A R RG+TIG
Sbjct: 260 ESPDGNIEAPEAAPATRFALAADHDSA-------LKAPDGEAYPLVLRFHQTVRGLTIG 311
Score = 111 bits (278), Expect = 1e-28
Identities = 74/245 (30%), Positives = 129/245 (52%), Gaps = 22/245 (8%)
Query: 599 ALKGSISLGLLDSSTAEPNAALKLYESKQLALAQAQAIKLTLPASAKLAAKAAIRYQGHQ 658
AL +L L+ + + A+ +Y A AQ I+ A K ++++ +
Sbjct: 33 ALAALFALSLVIHALNQRGPAITVY------FASAQGIE---------AGKTKVKFKDVE 77
Query: 659 VGEVTQVKLNTDLTTLTATAYLYGDYAEHFSRSDTEYHMVDAQISLAGIKAPETLITGPY 718
+G+VT++ L D T + L + AE F+ D+ + +V +++ +G+ ETL++G Y
Sbjct: 78 IGDVTELHLAPDRTRVQVRIELKKE-AEGFAVEDSRFWVVRPRMAGSGVSGLETLLSGSY 136
Query: 719 IGVLPGKSNQKATHFQAKLVESSYANVAEDALKFTLEDSNLGSMKVGTPIFFRGIKVGQI 778
IGV G S++K+T F V A+ +F L ++GS+ VG+P+FFR I VG I
Sbjct: 137 IGVDGGHSDKKSTEFTGLEVPPVIASDMPGR-RFVLVARDIGSLDVGSPVFFRRIPVGHI 195
Query: 779 DGYSLSSQGNSVLMQAHIEPQYSHLVNQSSQFWDASGI--KVDVGIFSGAQIEAGSLETL 836
+ Y+L G+S+ + A ++ Y V ++FW ASG+ ++D G G ++ SL +
Sbjct: 196 ESYALQPDGHSLFLSAFVKAPYDRFVTDGTRFWHASGVDLRLDAG---GLKLNTQSLAAM 252
Query: 837 LAGGI 841
L GG+
Sbjct: 253 LLGGV 257
Score = 66.6 bits (161), Expect = 4e-15
Identities = 67/320 (20%), Positives = 124/320 (38%), Gaps = 23/320 (7%)
Query: 368 ALPSSFALQESAPDLLKAKKRQLTITSTENMGLTAG-AEVRYKQLSIGEVLAVRLTKDLS 426
AL + FAL L + +T+ G+ AG +V++K + IG+V + L D +
Sbjct: 33 ALAALFALS-LVIHALNQRGPAITVYFASAQGIEAGKTKVKFKDVEIGDVTELHLAPDRT 91
Query: 427 AVEYQLELQPEFASLVRSDSYFIPESALSIDASLDGVSVKTRDMATLTKGAVSLIPGSSD 486
V+ ++EL+ E DS F + + G+ TL G+ + G
Sbjct: 92 RVQVRIELKKEAEGFAVEDSRFWVVRPRMAGSGVSGLE-------TLLSGSYIGVDGGH- 143
Query: 487 TPLAANTRLSLFSSIDEAKQFFARQQRLYFTLSSVDGADVSQGSPIYYKKMQIGSVESVN 546
++ + + F+ ++ + F L + D + GSP++++++ +G +ES
Sbjct: 144 ----SDKKSTEFTGLEVPPVIASDMPGRRFVLVARDIGSLDVGSPVFFRRIPVGHIESYA 199
Query: 547 WQSKTEDFAIKIAIDKQFQPLVQKPKVFWRNSAVDVSASLAGIDVAVAPLQGALKGSISL 606
Q + + + V FW S VD+ G+ + L L G ++
Sbjct: 200 LQPDGHSLFLSAFVKAPYDRFVTDGTRFWHASGVDLRLDAGGLKLNTQSLAAMLLGGVAF 259
Query: 607 GLLDSSTAEPNA------ALKLYESKQLALAQAQAIKLTL---PASAKLAAKAAIRYQGH 657
D + P A AL L +A L L L A + ++G
Sbjct: 260 ESPDGNIEAPEAAPATRFALAADHDSALKAPDGEAYPLVLRFHQTVRGLTIGAPVDFRGA 319
Query: 658 QVGEVTQVKLNTDLTTLTAT 677
++G+V + + D T T
Sbjct: 320 ELGQVRAITMAYDRETADFT 339
Score = 52.8 bits (125), Expect = 5e-11
Identities = 57/301 (18%), Positives = 127/301 (42%), Gaps = 19/301 (6%)
Query: 274 GIEVSLTMNDGNAIDKG-TRIVYRGITIGTLQSKQLTA--TGVTAVAKFEPEYANLLTSD 330
G +++ I+ G T++ ++ + IG + L T V + + E D
Sbjct: 51 GPAITVYFASAQGIEAGKTKVKFKDVEIGDVTELHLAPDRTRVQVRIELKKEAEGFAVED 110
Query: 331 GLFWLEGADISLSGIKNPERLLTGSVINFLPGTNANTALPSSFALQESAPDLLKAKKRQL 390
FW+ ++ SG+ E LL+GS I + G +++ L+ R+
Sbjct: 111 SRFWVVRPRMAGSGVSGLETLLSGSYIG-VDGGHSDKKSTEFTGLEVPPVIASDMPGRRF 169
Query: 391 TITSTENMGLTAGAEVRYKQLSIGEVLAVRLTKDLSAVEYQLELQPEFASLVRSDSYFIP 450
+ + + L G+ V ++++ +G + + L D ++ ++ + V + F
Sbjct: 170 VLVARDIGSLDVGSPVFFRRIPVGHIESYALQPDGHSLFLSAFVKAPYDRFVTDGTRFWH 229
Query: 451 ESALSIDASLDGVSVKTRDMATLTKGAVSL--IPGSSDTPLAA-NTRLSLFSSIDEA--- 504
S + + G+ + T+ +A + G V+ G+ + P AA TR +L + D A
Sbjct: 230 ASGVDLRLDAGGLKLNTQSLAAMLLGGVAFESPDGNIEAPEAAPATRFALAADHDSALKA 289
Query: 505 --KQFFARQQRLYFTLSSVDGADVSQGSPIYYKKMQIGSVESVN--WQSKTEDFAIKIAI 560
+ + R + T+ ++ G+P+ ++ ++G V ++ + +T DF + +
Sbjct: 290 PDGEAYPLVLRFHQTVRG-----LTIGAPVDFRGAELGQVRAITMAYDRETADFTPVVTV 344
Query: 561 D 561
D
Sbjct: 345 D 345
Score = 32.3 bits (72), Expect = 8e-05
Identities = 54/287 (18%), Positives = 112/287 (39%), Gaps = 28/287 (9%)
Query: 514 LYFTLSSVDGADVSQGSPIYYKKMQIGSVESVNWQSKTEDFAIKIAIDKQFQPLVQKPKV 573
+YF +S G + + + + +K ++IG V ++ ++I + K+ + +
Sbjct: 56 VYF--ASAQGIEAGK-TKVKFKDVEIGDVTELHLAPDRTRVQVRIELKKEAEGFAVEDSR 112
Query: 574 FWRNSAVDVSASLAGIDVAVAPLQGALKGSISLGLLDSSTAEPNAALKLYESKQLALAQA 633
FW V +AG V+ L+ L GS +G+ + + + E + +
Sbjct: 113 FWV-----VRPRMAGS--GVSGLETLLSGSY-IGVDGGHSDKKSTEFTGLEVPPVIASDM 164
Query: 634 QAIKLTLPAS--AKLAAKAAIRYQGHQVGEVTQVKLNTDLTTLTATAYLYGDYAEHFSRS 691
+ L A L + + ++ VG + L D +L +A++ Y +
Sbjct: 165 PGRRFVLVARDIGSLDVGSPVFFRRIPVGHIESYALQPDGHSLFLSAFVKAPYDRFVTDG 224
Query: 692 DTEYHM--VDAQISLAGIKAPETLITGPYIGVLPGKSNQ---------KATHFQAKLVES 740
+H VD ++ G+K + +G + +S AT F A +
Sbjct: 225 TRFWHASGVDLRLDAGGLKLNTQSLAAMLLGGVAFESPDGNIEAPEAAPATRF-ALAADH 283
Query: 741 SYANVAEDALKFTLE---DSNLGSMKVGTPIFFRGIKVGQIDGYSLS 784
A A D + L + + +G P+ FRG ++GQ+ +++
Sbjct: 284 DSALKAPDGEAYPLVLRFHQTVRGLTIGAPVDFRGAELGQVRAITMA 330