Pairwise Alignments

Query, 878 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

Subject, 554 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  184 bits (466), Expect = 2e-50
 Identities = 105/314 (33%), Positives = 159/314 (50%), Gaps = 12/314 (3%)

Query: 8   KVVKKKLFSPIWLLPIVALALGAWLGIKSIKESGIEIQIHFPSATGIDVGKTLVKYQGLT 67
           K  K +  SP+WL+P++A+ +G W+      + G EIQ+H  +A GI+VGKT +K + + 
Sbjct: 14  KESKVRQLSPVWLIPMIAVLIGCWMLYSYFSQLGTEIQLHLKTAEGIEVGKTFLKSRNVN 73

Query: 68  VGKVKDIGIDEDLKGVNVKVMMDYRAKPFLNKETLFWLVTPKASITGVEGLDALFSGNYI 127
           VG ++ I + +D   +     +   AK  L ++  FW+V P+  + GV GLD L SG YI
Sbjct: 74  VGVIESIKLSDDYSAIVATARISNDAKRMLKQDARFWVVKPRIGMEGVSGLDTLLSGAYI 133

Query: 128 AIQPGKGNAATF-FEAERQPPPMQIGTEGVMIELTADKLGSLDVGSPVFFRQIPVGSVVS 186
            ++PGK +   + F     PP      EG+ I LT+ + G L VG PV +    VG V +
Sbjct: 134 ELEPGKSSTPQYEFTVLDNPPVASADEEGMRITLTSPQAGKLSVGDPVLYEGFRVGRVET 193

Query: 187 YRLDGNAR-VIISAFIQEQYARLVKKNSHFWNVSGVKVDASLAGIKVNTESLASILAGGV 245
              +   R      FI + Y  LV+ NS FW  SG+ +  S  G+ +   SL ++L+GGV
Sbjct: 194 LGFNTERREAFYQLFINKPYDELVRDNSQFWLTSGINMQLSAKGLNLQVGSLETLLSGGV 253

Query: 246 SFSSDD----KAPAAQNGDSFALYDSETSALGGIE------VSLTMNDGNAIDKGTRIVY 295
           SF   +     A   ++G  F LYDS+  A   +       V L       +  G  + +
Sbjct: 254 SFCLPEGRLAGAKITEDGHDFRLYDSQELASQSVYDKYLEFVMLFDESIRGLHDGATVEF 313

Query: 296 RGITIGTLQSKQLT 309
           RGITIG +    LT
Sbjct: 314 RGITIGEVVKSPLT 327



 Score =  114 bits (285), Expect = 2e-29
 Identities = 66/231 (28%), Positives = 116/231 (50%), Gaps = 12/231 (5%)

Query: 627 QLALAQAQAIKLTLPASAKLAAKAAIRYQGHQVGEVTQVKLNTDLTTLTATAYLYGDYAE 686
           QL L  A+ I++          K  ++ +   VG +  +KL+ D + + ATA +  D A+
Sbjct: 51  QLHLKTAEGIEV---------GKTFLKSRNVNVGVIESIKLSDDYSAIVATARISND-AK 100

Query: 687 HFSRSDTEYHMVDAQISLAGIKAPETLITGPYIGVLPGKSNQKATHFQAKLVESSYANVA 746
              + D  + +V  +I + G+   +TL++G YI + PGKS+     F   L     A+  
Sbjct: 101 RMLKQDARFWVVKPRIGMEGVSGLDTLLSGAYIELEPGKSSTPQYEFTV-LDNPPVASAD 159

Query: 747 EDALKFTLEDSNLGSMKVGTPIFFRGIKVGQIDGYSLSSQGNSVLMQAHIEPQYSHLVNQ 806
           E+ ++ TL     G + VG P+ + G +VG+++    +++      Q  I   Y  LV  
Sbjct: 160 EEGMRITLTSPQAGKLSVGDPVLYEGFRVGRVETLGFNTERREAFYQLFINKPYDELVRD 219

Query: 807 SSQFWDASGIKVDVGIFSGAQIEAGSLETLLAGGINVATKETTQTGNRLSQ 857
           +SQFW  SGI + +    G  ++ GSLETLL+GG++    E    G ++++
Sbjct: 220 NSQFWLTSGINMQLSA-KGLNLQVGSLETLLSGGVSFCLPEGRLAGAKITE 269



 Score = 73.9 bits (180), Expect = 2e-17
 Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 6/210 (2%)

Query: 274 GIEVSLTMNDGNAIDKG-TRIVYRGITIGTLQSKQLTA--TGVTAVAKFEPEYANLLTSD 330
           G E+ L +     I+ G T +  R + +G ++S +L+   + + A A+   +   +L  D
Sbjct: 47  GTEIQLHLKTAEGIEVGKTFLKSRNVNVGVIESIKLSDDYSAIVATARISNDAKRMLKQD 106

Query: 331 GLFWLEGADISLSGIKNPERLLTGSVINFLPGTNANTALPSSFALQESAPDLLKAKK-RQ 389
             FW+    I + G+   + LL+G+ I   PG ++       F + ++ P     ++  +
Sbjct: 107 ARFWVVKPRIGMEGVSGLDTLLSGAYIELEPGKSSTPQY--EFTVLDNPPVASADEEGMR 164

Query: 390 LTITSTENMGLTAGAEVRYKQLSIGEVLAVRLTKDLSAVEYQLELQPEFASLVRSDSYFI 449
           +T+TS +   L+ G  V Y+   +G V  +    +     YQL +   +  LVR +S F 
Sbjct: 165 ITLTSPQAGKLSVGDPVLYEGFRVGRVETLGFNTERREAFYQLFINKPYDELVRDNSQFW 224

Query: 450 PESALSIDASLDGVSVKTRDMATLTKGAVS 479
             S +++  S  G++++   + TL  G VS
Sbjct: 225 LTSGINMQLSAKGLNLQVGSLETLLSGGVS 254



 Score = 48.9 bits (115), Expect = 8e-10
 Identities = 71/372 (19%), Positives = 155/372 (41%), Gaps = 41/372 (11%)

Query: 518 LSSVDGADVSQGSPIYYKKMQIGSVESVNWQSKTEDFAIKIAIDKQFQPLVQKPKVFWRN 577
           L + +G +V + + +  + + +G +ES+              I    + ++++   FW  
Sbjct: 54  LKTAEGIEVGK-TFLKSRNVNVGVIESIKLSDDYSAIVATARISNDAKRMLKQDARFW-- 110

Query: 578 SAVDVSASLAGIDVAVAPLQGALKGSISLGLLDSSTAEPNAALKLYESKQLALAQAQAIK 637
             V     + G+      L GA      + L    ++ P     + ++  +A A  + ++
Sbjct: 111 -VVKPRIGMEGVSGLDTLLSGAY-----IELEPGKSSTPQYEFTVLDNPPVASADEEGMR 164

Query: 638 LTL--PASAKLAAKAAIRYQGHQVGEVTQVKLNTDLTTLTATAYLYGDYAEHFSRSDTEY 695
           +TL  P + KL+    + Y+G +VG V  +  NT+        ++   Y E   R ++++
Sbjct: 165 ITLTSPQAGKLSVGDPVLYEGFRVGRVETLGFNTERREAFYQLFINKPYDE-LVRDNSQF 223

Query: 696 HM---VDAQISLAGIKAP----ETLITGPYIGVLP------GKSNQKATHFQA-KLVESS 741
            +   ++ Q+S  G+       ETL++G     LP       K  +    F+     E +
Sbjct: 224 WLTSGINMQLSAKGLNLQVGSLETLLSGGVSFCLPEGRLAGAKITEDGHDFRLYDSQELA 283

Query: 742 YANVAEDALKFT-LEDSNLGSMKVGTPIFFRGIKVGQIDGYSLSSQGNSVLMQAHIEPQY 800
             +V +  L+F  L D ++  +  G  + FRGI +G++    L+ Q         ++P +
Sbjct: 284 SQSVYDKYLEFVMLFDESIRGLHDGATVEFRGITIGEVVKSPLTLQ--------QLDPHF 335

Query: 801 SHLVNQSSQFWDASGIKVDVG-IFSGA-QIEAGSLETLLAGGINVATKETTQTGNRLSQG 858
               + +        +K+++  +F  A Q+   +L   +   ++   + + +TGN L+  
Sbjct: 336 GRFSHGTIPVL----VKIELARVFEHAEQVGLDNLRAEIERELHSGLRASLKTGNLLTGA 391

Query: 859 AVIKLQHKAQSE 870
             I L   A ++
Sbjct: 392 LFIDLDLYADAK 403