Pairwise Alignments

Query, 582 a.a., ATP-dependent protease (RefSeq) from Shewanella sp. ANA-3

Subject, 798 a.a., DNA-binding protein from Pseudomonas simiae WCS417

 Score = 52.4 bits (124), Expect = 7e-11
 Identities = 64/242 (26%), Positives = 99/242 (40%), Gaps = 38/242 (15%)

Query: 294 RGKATINAASVEHALEQANYRHNSSEEFSGQSFDDNFINLPTEGAMVGQINGLTVIDAID 353
           R    + A S+EH L    +R+  +E+                   VGQ+ GL    A  
Sbjct: 560 RFSVKVTADSLEHFLGVKKFRYGLAEQQD----------------QVGQVTGL----AWT 599

Query: 354 HSYGEPARITATVHYGDGEVADIERKSELGG----NIHAKGMMILSACLYRIFGRDAPLH 409
              GE   I A V  G G++    +   LG     +I A   ++ S         D    
Sbjct: 600 QVGGELLTIEAAVIPGKGQLI---KTGSLGDVMVESITAAQTVVRSRAKSLGIPLDFHEK 656

Query: 410 LNANIVFEQSYQEIDGDSASLAEYCCLMSAIAEQPIIQSLAITGALDQFGNVQAIGGINE 469
            + +I   +     DG SA +     L+SA+   P+   +A+TG +   G V AIGG+ E
Sbjct: 657 HDTHIHMPEGATPKDGPSAGVGMCTALVSALTGIPVRADVAMTGEITLRGQVLAIGGLKE 716

Query: 470 KIEGFFNLCERRGLTGEQGVIMPKSNVLQLNLAPKVITAVGKGQFHIYAIEHMDEAVELL 529
           K+     L   RG  G + VI+P+ NV  L   P  I    K    I  ++ +DE +++ 
Sbjct: 717 KL-----LAAHRG--GIKTVIIPEENVRDLKEIPDNI----KQDLQIKPVKWIDEVLQIA 765

Query: 530 MQ 531
           +Q
Sbjct: 766 LQ 767