Pairwise Alignments

Query, 715 a.a., peptidyl-dipeptidase Dcp (RefSeq) from Shewanella sp. ANA-3

Subject, 683 a.a., oligopeptidase A from Pseudomonas simiae WCS417

 Score =  357 bits (917), Expect = e-103
 Identities = 234/688 (34%), Positives = 370/688 (53%), Gaps = 32/688 (4%)

Query: 45  ATNVLLSKSPLQDQAPQFNLIKSSDYAPAFAQGIKEHEAEIAAIIANK-QAPTFDNTILA 103
           A N LL    L    P F+ I++    PA  Q + ++   I  I+ ++ + PT+   +LA
Sbjct: 3   ANNPLLQSYDL----PPFSAIRAEHVQPAIEQILADNRVAIEGILQSQGKHPTWAGLVLA 58

Query: 104 METSGELLTRVSRTFFNLAGLISDDDFQKTEADLAPKLSAHRDNIYLDPSLFARVETVYQ 163
           M+   + L        +L  + +  + ++      P LSA+   +  +  LF   E +  
Sbjct: 59  MDELNDRLGAAWSPVSHLNAVCNSAELREAYEGCLPALSAYSTEMGQNRELFQAFEALAN 118

Query: 164 --QRAGLNAEDKRLVEFYYEQFVRAGAKLSDADKAKMRDFNAELATLATEFSQNSLKSFK 221
             + AG +   K ++E     F  +G  L    + +  +  ++L+ L ++FS   L + +
Sbjct: 119 SPEAAGFDVAQKTILEHALRDFRLSGIDLPPEQQKRYAEVQSKLSELGSKFSNQLLDATQ 178

Query: 222 DDVIVVTDKAQLDGLSDSEIATLAAAAQAAGKTGYLITLVNTTRQPILASLNNRELRQKV 281
                VTD+A L GL+DS  A +AAAAQA G  G+LITL   +   ++    +R LR++V
Sbjct: 179 AWTKHVTDEATLAGLTDSAKAQMAAAAQAKGLDGWLITLEFPSYYAVMTYAQDRALREEV 238

Query: 282 WETSAHRAVAS--------NGPLIVKMAQLRAKKANLLGFDTWAAYAVADQMAKTPSAVY 333
           +     RA           NGP++ ++  LR + A LLG+ +++  ++A +MA++   V 
Sbjct: 239 YAAYCTRASDQGPNAGQNDNGPVMEQILDLRQELAKLLGYASFSELSLATKMAESSDQVL 298

Query: 334 EILDDLAPKALAHAKADAADIQAEIKKAGGNFELQPWDWAYYAEKVRQQKYALDESSIKP 393
             L DLA ++   A  D   ++A   + G   +LQ WD  +Y EK+R+Q+Y++ + +++ 
Sbjct: 299 NFLRDLAKRSKPFAAQDLQQLKAYAAEQGCA-DLQSWDSGFYGEKLREQRYSVSQEALRA 357

Query: 394 YFEFNSVLKDGLFFAMHKLYGISVKPRTDLPVWNSDVLAFEVFDKDNSS-IGLFYLDPYA 452
           YF  + VL  GLF  + +LYGI +  +     W+ DV  FE+  K+N   +G F+ D YA
Sbjct: 358 YFPIDKVL-GGLFAIVQRLYGIEIAEQKGFDTWHPDVRLFEI--KENGQHVGRFFFDLYA 414

Query: 453 REGKGGGAWMD----EFVTQSGLLGTKPVVYNALNIPKPADG--PTLMTFDEVTTMFHEF 506
           R  K GGAWMD       T  G+L + PV     N   PAD   P L+T DEVTT+FHEF
Sbjct: 415 RANKRGGAWMDGARDRRRTIDGVLQS-PVANLVCNFT-PADSGKPALLTHDEVTTLFHEF 472

Query: 507 GHAVHGLFSKVKYPSVAGTS-TARDFVEFPSQVNEDWNIDPAVIANYAKHYQTGEPIPKA 565
           GH +H L ++V++  V+G +  A D VE PSQ  E+W  +P  +A  + HY+TGEP+P+ 
Sbjct: 473 GHGLHHLLTRVEHAGVSGINGVAWDAVELPSQFMENWCWEPEGLALISGHYETGEPLPQD 532

Query: 566 LLDKILASNKFGQGFDTVEYLAAALLDMEWHSIGADTQNKDVEQFEHQVLAKHGLDFAPI 625
           LL+K+LA+  F  G   V  L  +L D E H+   D   + V Q    V  +  +   P 
Sbjct: 533 LLEKMLAAKNFQSGLMMVRQLEFSLFDFELHATHGD--GRSVAQVLEGVRDEVSVMRPPA 590

Query: 626 PPRYKSSYFSHAFSGGYSAGYYAYLWTEVFAADAFAYMGQHGGLKAENGDKFRDAVLSKG 685
             R+ +S F+H F+GGY+AGYY+Y W EV +ADAF+   + G L AE G  FR+A+L++G
Sbjct: 591 YNRFPNS-FAHIFAGGYAAGYYSYKWAEVLSADAFSKFEEEGVLNAETGRAFREAILARG 649

Query: 686 NSEDLMQDYIHFTGQKPTTDALLKRRGL 713
            S++ M  ++ F G+ P+ DALL+  GL
Sbjct: 650 GSQEPMVLFVDFRGRAPSIDALLRHSGL 677