Pairwise Alignments

Query, 715 a.a., peptidyl-dipeptidase Dcp (RefSeq) from Shewanella sp. ANA-3

Subject, 686 a.a., peptidyl-dipeptidase from Agrobacterium fabrum C58

 Score =  464 bits (1194), Expect = e-135
 Identities = 257/672 (38%), Positives = 393/672 (58%), Gaps = 23/672 (3%)

Query: 60  PQFNLIKSSDYAPAFAQGIKEHEAEIAAIIANKQAPTFDNTILAMETSGELLTRVSRTFF 119
           P+F+ +K  D+APAF   +  HE EI AI  N +AP+F+NT+ A+E +G+ L+R+S  F+
Sbjct: 21  PKFDAVKDEDFAPAFDAALFSHEQEIDAIAGNPEAPSFENTVTALEIAGDELSRISSLFW 80

Query: 120 NLAGLISDDDFQKTEADLAPKLSAHRDNIYLDPSLFARVETVYQQRA--GLNAEDKRLVE 177
           N AG  ++   Q  E ++APK+S H   I ++ +LF R++T++++R   GL  E+KR++E
Sbjct: 81  NKAGANTNGVIQALEREIAPKMSRHYSKIGMNEALFKRIDTLWEKREALGLTGEEKRVLE 140

Query: 178 FYYEQFVRAGAKLSDADKAKMRDFNAELATLATEFSQNSLKSFKDDVIVVTDKAQLDGLS 237
            +++ FV +GAKL    + ++   N ELA L  +F QN L   K   ++++   +L G+ 
Sbjct: 141 RHWKGFVHSGAKLPKERQERLAAINEELAGLGAKFGQNVLADEKSWKLLLSTDEELAGIP 200

Query: 238 DSEIATLAAAAQAAGKTG-YLITLVNTTRQPILASLNNRELRQKVWETSAHRAV----AS 292
                 +A AA   G+ G + +TL  +  +P L     R+LR++ ++    R        
Sbjct: 201 GFLRDAMAGAAGEHGEDGKFAVTLSRSIIEPFLTFSERRDLREQAFKAWVARGENGGETD 260

Query: 293 NGPLIVKMAQLRAKKANLLGFDTWAAYAVADQMAKTPSAVYEILDDLAPKALAHAKADAA 352
           N  ++ +  +LR +KA LLG+  +AAY + D MAKTP AV  +L  +  KA+  A  + A
Sbjct: 261 NREIVRRTLELREEKAKLLGYANFAAYKLDDTMAKTPDAVNGLLRQVWEKAVQRAGEEEA 320

Query: 353 DIQAEIKKAGGNFELQPWDWAYYAEKVRQQKYALDESSIKPYFEFNSVLKDGLFFAMHKL 412
            + A I + G N E+ PWDW +YAEK+R QK+   E+ +KPY +   ++ +  F    +L
Sbjct: 321 GLAAIIAEEGKNHEVLPWDWRHYAEKLRAQKFNFSEAELKPYLQLEKII-EACFDVAERL 379

Query: 413 YGISVKPRTDLPVWNSDVLAFEVFDKDNSSIGLFYLDPYAREGKGGGAWMDEFVTQ---- 468
           +GI       +  ++ DV  FE+ D       +F  D +AR  K  GAWM  F +Q    
Sbjct: 380 FGIHAVEVKGVVGYHPDVRIFEIRDNKGDLKAMFLGDYFARPSKRSGAWMSSFQSQHKLP 439

Query: 469 --SGLLGTKPVVYNALNIPKPADG-PTLMTFDEVTTMFHEFGHAVHGLFSKVKYPSVAGT 525
              G +G  P++YN  N  KPA+G P L++ D+  T+FHEFGHA+HG+ S V YPSV+GT
Sbjct: 440 LKDGTVGEIPIIYNVCNFAKPAEGKPALLSLDDARTLFHEFGHALHGMLSDVTYPSVSGT 499

Query: 526 STARDFVEFPSQVNEDWNIDPAVIANYAKHYQTGEPIPKALLDKILASNKFGQGFDTVEY 585
             +RDFVE PSQ+ E W   P ++  YA HY+TG P+PKALLDK+LA+  F  GF+TVE+
Sbjct: 500 GVSRDFVELPSQLYEHWLTVPEILEKYALHYETGAPMPKALLDKVLAAQTFNAGFNTVEF 559

Query: 586 LAAALLDMEWHSIGADTQNKDVEQFEHQVLAKHGLDF-APIPPRYKSSYFSHAFSG-GYS 643
            ++A++DM +H     T++   +    Q     GL+    I  R+ + +F H FSG GYS
Sbjct: 560 TSSAIVDMAFH-----TRDSVADPMAVQGEVLSGLNMPKSIVMRHATPHFQHVFSGDGYS 614

Query: 644 AGYYAYLWTEVFAADAFAYMGQHG-GLKAENGDKFRDAVLSKGNSEDLMQDYIHFTGQKP 702
           AGYY+Y+W+EV  ADAFA   + G     E   + +D + S G S D  + Y+ F G+ P
Sbjct: 615 AGYYSYMWSEVLDADAFAAFEETGNAFDGEMARRLKDNIYSVGGSIDPEEAYLAFRGKMP 674

Query: 703 TTDALLKRRGLV 714
           + DA+L +RGLV
Sbjct: 675 SPDAMLLKRGLV 686