Pairwise Alignments

Query, 1433 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella sp. ANA-3

Subject, 637 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  393 bits (1009), Expect = e-113
 Identities = 220/555 (39%), Positives = 323/555 (58%), Gaps = 9/555 (1%)

Query: 872  KQKEEQLKLFEKAIENISEGMFILDSEYRFVEVNEACCRISQRNRTDFIG---NLLTFDL 928
            K+  E+L+      +   EG+ + D++   V VN A   I+  +R D +G   +L     
Sbjct: 77   KENRERLRQAAAVFDCTREGVLVTDTKGLIVHVNRAFMEITGYSREDVMGRQPSLFKSGR 136

Query: 929  YPESFSNQIRTMLKQQGRWASEVEASRGDNSHFHMELTIDAIYDELGELSHYVGVFSDIS 988
            +  +F  Q+   L++ G W+ E+   R     +    TI  I+D+ G++SHYV VFSDIS
Sbjct: 137  HSSNFYQQMFQSLERTGEWSGEIWNRRKSGEIYPQWQTIRVIHDDQGQVSHYVAVFSDIS 196

Query: 989  RRKQQEEELRKLTNNDLLTGLPNRSNLQVTLGNLVNKEITH----ALMVLDLDNFKRIND 1044
              K  E EL  L ++D LT LPNR          +    TH    AL++LDLD+FK IND
Sbjct: 197  AIKDSEHELAHLAHHDPLTDLPNRLLFTDRAEQALASAQTHKRGCALLLLDLDHFKIIND 256

Query: 1045 SLGHQIGDQLLKLVSIRIKSILPKNTSIYRLGGDEFAIVLDKTSDISASAAIAGRVIEAF 1104
            SLGH +GDQLLKLV  R+K++     ++ RLGGDEFA++ +    ++ +A +A R+++A 
Sbjct: 257  SLGHNVGDQLLKLVGERLKALFGPGVTLARLGGDEFAVLAESCPQVAQAAGLAQRMLDAM 316

Query: 1105 KTMFEIGNEQLVLGVSIGIVFYPEDEQSEQALLRKADIAMYHAKSAGGNCYQFYSESLNQ 1164
            K  F     QL +  SIGI  +P D  S + LLR AD A++ AKSAG   Y  Y+E L  
Sbjct: 317  KQPFIFDGHQLFISASIGISLFPSDALSAEQLLRNADSALFKAKSAGREGYALYTEELTA 376

Query: 1165 HAIKQLEIENLIREGLKEDLFEVYYQPKVDLKSGHVAGMEALVRLNHPTRGLIPPNDFIP 1224
            HA  ++EI + +R  L++    VYYQP  DL    + G+EALVR  HP RGL+PP +FIP
Sbjct: 377  HAQNRVEIASELRRALEQQELCVYYQPVHDLNDSRLIGVEALVRWQHPERGLVPPGEFIP 436

Query: 1225 LAEENGLIIEIGEIVLRKACFAAQKWREQGLFKGRVAVNLSSRQFALPDLQQRIESILRL 1284
            +AE  GLI +I   V+ +AC     W  QG     +A+N+SSR FA  +L +++  +L  
Sbjct: 437  IAERTGLIADIDAWVMNQACRQMCDWLAQGTPLSFIAINVSSRLFARRELYEQVAQVLHD 496

Query: 1285 TQLPASHLELEITEGTVIKQPEMAITVMQQLAKMGVSLALDDFGTGYSSLSYLKRFPIHT 1344
            T L  + LELE+TE  V++ PE+A+  + +L ++G+ LA+DDFGTGYSSL  LKR P+  
Sbjct: 497  TGLDPAFLELEVTESAVMEDPEVALEQLHRLRELGLRLAIDDFGTGYSSLLRLKRLPVQK 556

Query: 1345 LKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLSVVGEGVEQAAQLNILRALNCEEIQGY 1404
            LKID+ FV  +   + D  +V  +I +A +MG+ V  EG+EQ  Q   L    C+  QGY
Sbjct: 557  LKIDQGFVAGLPWDEDDAAIVRVVIALAKSMGMQVHAEGIEQREQARFLLDQQCDLGQGY 616

Query: 1405 IFSKAI--NEIEFTQ 1417
             F + +   EI++++
Sbjct: 617  WFGRPVPAGEIDWSK 631