Pairwise Alignments

Query, 762 a.a., CheA signal transduction histidine kinases (RefSeq) from Shewanella sp. ANA-3

Subject, 735 a.a., chemotaxis protein CheA from Pseudomonas simiae WCS417

 Score =  828 bits (2140), Expect = 0.0
 Identities = 461/769 (59%), Positives = 555/769 (72%), Gaps = 43/769 (5%)

Query: 1   MAFDVDEEILQDFLIEAGEILELLQEQLVALENNPDDTNLLNAIFRGFHTVKGGAGFLSL 60
           M+F  DEEILQDFL+EAGEILE L EQLV LE+ PDD NLLNAIFRGFHTVKGGAGFL L
Sbjct: 1   MSFGADEEILQDFLVEAGEILEQLSEQLVELESRPDDANLLNAIFRGFHTVKGGAGFLQL 60

Query: 61  TPMVDVCHEAENTFDLLRTGKRSVSAELMDIILQAVDAINTMFAQTQQGEQQDPADPALL 120
             +V+ CH AEN FD+LR G+R V +ELMD+IL+A+DA+N MF++ ++      A P LL
Sbjct: 61  HELVECCHIAENVFDILRKGERHVDSELMDVILEALDAVNGMFSEVRERAPITAATPELL 120

Query: 121 AKLKMLSSGEPLPSESGQSSAEVEPLPEPEP-----EPEPVIETVFEVAAVEDMPIEKSE 175
           A L   +    L S +  + A  EP+ E EP     E E ++ ++  V A  + P   + 
Sbjct: 121 AALARYAEPADL-SAAPVAEAAPEPVAEAEPDVTDSEFEQLLNSLSAVKAEAEAPA--AA 177

Query: 176 LSDSSIDEIDEAEFEALLDALHGAGKGPGVSAPQADAAPAVQNKPQATSASASDDITDDE 235
           ++  + ++I +AEFE+LLD LHG G+     A  A    AV   P A +A+A+ DITDDE
Sbjct: 178 VAAPTSEDITDAEFESLLDQLHGKGQ----FAADAVTPAAVSEAPAAPTANANTDITDDE 233

Query: 236 FEALLDELHGSGKFKGKVEEPAKPKAEAVAAAPKPAAPAVDSDEITED-EFERLLDELHG 294
           FEALLD+LHG G F       A P+  A AAAP  A+ A   D +  D EFE LLDELHG
Sbjct: 234 FEALLDQLHGKGTFVAD----ALPEVAATAAAPAAASAAPAGDGLISDHEFESLLDELHG 289

Query: 295 KGGAPAKVTAKAESAPAKTEPAKAPPSAAAPSTPAAPKASVATPATPPAVKAKTDVAVAE 354
           KG         +E APA T    AP +A A +   AP A  A  A P             
Sbjct: 290 KGKF-------SEVAPAATVATAAPVAAKAAAPAPAPAAKPAPAAAP------------- 329

Query: 355 KAPAKAAAAASANVP--QGETTVRVDTARLDQIMNMVGELVLVRNRLLSLGISRDDEEMS 412
            APA+AAAA  A+ P  + ETTVRVDTARLD IMNMVGELVLVRNRL+ LG+S  DE M 
Sbjct: 330 -APARAAAAPVADKPASEAETTVRVDTARLDDIMNMVGELVLVRNRLVRLGLSSGDEAMQ 388

Query: 413 KALANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARTLNKEIDLVLVGEETDLDK 472
           KA++NLD+VTADLQ AVMKTRMQPIKKVFGRFPR+VRDLAR L KEI+L LVGEETDLDK
Sbjct: 389 KAVSNLDVVTADLQTAVMKTRMQPIKKVFGRFPRLVRDLARQLKKEINLELVGEETDLDK 448

Query: 473 NLVEALADPLVHLVRNSVDHGIEMPNDREASGKPRTGTITLSASQEGDHILLKIEDDGAG 532
           NLVEALADPLVHLVRN+VDHG+E P +REASGK R G + L+A QEGDHILL I DDG G
Sbjct: 449 NLVEALADPLVHLVRNAVDHGVETPEEREASGKSRNGKVILAAEQEGDHILLSITDDGKG 508

Query: 533 MDPEKLKQIAIKRGVLDEDTAARMTDSEAYNLIFAPGFSTKVEISDISGRGVGMDVVKTR 592
           MDP  L+ IA+KRGV+D+D A R+TDSE YNLIFAPGFSTK EISD+SGRGVGMDVVKT+
Sbjct: 509 MDPAILRNIAVKRGVMDKDAADRLTDSECYNLIFAPGFSTKTEISDVSGRGVGMDVVKTK 568

Query: 593 ITQLNGTVHIDSMKGKGTVLEIKVPLTLAIMPTLMVDVAKQVFALPLSSVNEIFHLDLTK 652
           I+QLNG+++I S KG+G+ + IKVPLTLAIMPTLMV +  Q FA PL +VNEIFHLDL++
Sbjct: 569 ISQLNGSINIYSTKGQGSKIVIKVPLTLAIMPTLMVMLGNQAFAFPLVNVNEIFHLDLSR 628

Query: 653 TNIVDGQLTVIVRNKAVPLFYLEQWLHRNRTNFKHGDKKHGHVVIVQLGMMQIGFVVDAL 712
           TN+VDGQ  VIVR+KA+PLFYL++WL     + KH +++ GHVVI+ +G  +IGFVVD L
Sbjct: 629 TNVVDGQEVVIVRDKALPLFYLKRWL---VASAKHEEQREGHVVILSVGTQRIGFVVDQL 685

Query: 713 IGQEEVVIKPLGALLHGTPGMAGATITSDGGIALILDVPGLLKHYAKNK 761
           +GQEEVVIKPLG +L GTPGM+GATIT DG IALILDVP +LK YA  +
Sbjct: 686 VGQEEVVIKPLGKMLQGTPGMSGATITGDGRIALILDVPSMLKRYAARR 734