Pairwise Alignments

Query, 762 a.a., CheA signal transduction histidine kinases (RefSeq) from Shewanella sp. ANA-3

Subject, 747 a.a., Chemotaxis histidine kinase CheA from Pseudomonas putida KT2440

 Score =  822 bits (2122), Expect = 0.0
 Identities = 462/789 (58%), Positives = 563/789 (71%), Gaps = 71/789 (8%)

Query: 1   MAFDVDEEILQDFLIEAGEILELLQEQLVALENNPDDTNLLNAIFRGFHTVKGGAGFLSL 60
           M+F  DEEILQDFL+EAGEILE L EQLV LE+ PDD +LLNAIFRGFHTVKGGAGFL L
Sbjct: 1   MSFGADEEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQL 60

Query: 61  TPMVDVCHEAENTFDLLRTGKRSVSAELMDIILQAVDAINTMFAQTQQGEQQDPADPALL 120
             +V+ CH AEN FD+LR G+R V AELMD++L+A+D +N+MF Q ++  +  PA PALL
Sbjct: 61  NELVECCHIAENVFDVLRKGERRVDAELMDVVLEALDTVNSMFGQVRERAEVTPATPALL 120

Query: 121 AKLKMLSSGEPLPSESGQSSAEVEPLPEP------------EPEPEPVIETVFE------ 162
           A L  L+       E G + A   P+P P            E + + + ++ FE      
Sbjct: 121 AALSRLA-------EPGAAEAVAAPVPAPVADVVAAAPAEAEEQHQDITDSEFEQLLDSL 173

Query: 163 ------VAAVEDMPIEKSELSDSSIDEIDEAEFEALLDALHGAGK-GPGVSAPQADAAPA 215
                  AA E M   + E    + DEI +AEFE+LLD LHG G+    V+AP       
Sbjct: 174 DAIKAQAAADEQM---QGETVSGAGDEITDAEFESLLDQLHGKGQFNAEVAAP------- 223

Query: 216 VQNKPQATSASA-SDDITDDEFEALLDELHGSGKFKGKVEEPAKPKAEAVAAAPKPAAP- 273
               P A S+   SD+ITD EFE+LLD+LHG G F+          A   A AP PAAP 
Sbjct: 224 ----PVAVSSEVVSDEITDAEFESLLDQLHGKGTFQAG--------ALPAAQAPAPAAPD 271

Query: 274 -AVDSDEITEDEFERLLDELHGKGGAPAKVTAKAESAPAKTEPAKAPPSAAAPSTPAAPK 332
            +  SDEI+E EFE LLD+LHGKG     V A    APA  + A+AP +A A S P    
Sbjct: 272 NSAASDEISEHEFEALLDQLHGKGKFGGDVAAV--EAPAAVQ-AQAPAAAKAESQP---- 324

Query: 333 ASVATPATPPAVKAKTDVAVAEKAPAKAAAAASANVPQGETTVRVDTARLDQIMNMVGEL 392
             VA PA  PA    +  A A +APA AA   +A+  + ETTVRVDTARLD+IMNMVGEL
Sbjct: 325 --VAKPAAAPAPSPASKPAAAPRAPAPAAEKHAAS--EAETTVRVDTARLDEIMNMVGEL 380

Query: 393 VLVRNRLLSLGISRDDEEMSKALANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLA 452
           VLVRNRL+ LG++  DE MSKA++NLD+VTADLQ AVMKTRMQPIKKVFGRFPR+VRDLA
Sbjct: 381 VLVRNRLVRLGLNSGDEAMSKAVSNLDVVTADLQTAVMKTRMQPIKKVFGRFPRLVRDLA 440

Query: 453 RTLNKEIDLVLVGEETDLDKNLVEALADPLVHLVRNSVDHGIEMPNDREASGKPRTGTIT 512
           R L KEI+L LVGEETDLDKNLVEALADPLVHLVRN+VDHGIEMP++REASGK RTG + 
Sbjct: 441 RQLKKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGIEMPDEREASGKARTGRVV 500

Query: 513 LSASQEGDHILLKIEDDGAGMDPEKLKQIAIKRGVLDEDTAARMTDSEAYNLIFAPGFST 572
           LSA QEGDHILL I DDG GMDP  L+  A+++G++D+D A R+++S+ YNLIFAPGFST
Sbjct: 501 LSAEQEGDHILLSISDDGKGMDPNILRAKAVEKGLMDKDAAERLSESDCYNLIFAPGFST 560

Query: 573 KVEISDISGRGVGMDVVKTRITQLNGTVHIDSMKGKGTVLEIKVPLTLAIMPTLMVDVAK 632
           K EISD+SGRGVGMDVVKT+I+QLNG+++I S KG+G+ + IKVPLTLAIMPTLMV +  
Sbjct: 561 KTEISDVSGRGVGMDVVKTKISQLNGSINIFSAKGQGSKIVIKVPLTLAIMPTLMVMLGN 620

Query: 633 QVFALPLSSVNEIFHLDLTKTNIVDGQLTVIVRNKAVPLFYLEQWLHRNRTNFKHGDKKH 692
           Q FA PL +VNEIFHLDL++TN+VDGQ  VIVR+KA+PLFYL++WL + +    H ++  
Sbjct: 621 QAFAFPLVNVNEIFHLDLSRTNVVDGQEVVIVRDKALPLFYLKRWLVQGQV---HEEQHE 677

Query: 693 GHVVIVQLGMMQIGFVVDALIGQEEVVIKPLGALLHGTPGMAGATITSDGGIALILDVPG 752
           GHVVI+ +G  +IGFVVD L+GQEEVVIKPLG +L GTPGM+GATIT DG IALILDVP 
Sbjct: 678 GHVVILSVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIALILDVPS 737

Query: 753 LLKHYAKNK 761
           +LK YA  +
Sbjct: 738 MLKRYAARR 746