Pairwise Alignments

Query, 762 a.a., CheA signal transduction histidine kinases (RefSeq) from Shewanella sp. ANA-3

Subject, 654 a.a., fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein from Escherichia coli BL21

 Score =  295 bits (754), Expect = 7e-84
 Identities = 171/419 (40%), Positives = 250/419 (59%), Gaps = 15/419 (3%)

Query: 339 ATPPAVKAKTDVAVAEKAPAKAAAAASANVPQGETTVRVDTARLDQIMNMVGELVLVRNR 398
           +TPP +K       AE+AP               T++RV   ++DQ++N+VGELV+ ++ 
Sbjct: 233 STPPVLKL-----AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSM 287

Query: 399 LLSLGISRDDE---EMSKALANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARTL 455
           L       D     ++  ++  L     DLQ +VM  RM P++ VF R+PR+VRDLA  L
Sbjct: 288 LAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKL 347

Query: 456 NKEIDLVLVGEETDLDKNLVEALADPLVHLVRNSVDHGIEMPNDREASGKPRTGTITLSA 515
            K+++L LVG  T+LDK+L+E + DPL HLVRNS+DHGIE+P  R A+GK   G + LSA
Sbjct: 348 GKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSA 407

Query: 516 SQEGDHILLKIEDDGAGMDPEKLKQIAIKRGVLDEDTAARMTDSEAYNLIFAPGFSTKVE 575
             +G +I +++ DDGAG++ E++   A  +G+     +  M+D E   LIFAPGFST  +
Sbjct: 408 EHQGGNICIEVTDDGAGLNRERILAKAASQGL---TVSENMSDDEVAMLIFAPGFSTAEQ 464

Query: 576 ISDISGRGVGMDVVKTRITQLNGTVHIDSMKGKGTVLEIKVPLTLAIMPTLMVDVAKQVF 635
           ++D+SGRGVGMDVVK  I ++ G V I S +G GT + I +PLTLAI+  + V VA +VF
Sbjct: 465 VTDVSGRGVGMDVVKRNIQEMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVF 524

Query: 636 ALPLSSVNEIFH-LDLTKTNIVDGQLTVIVRNKAVPLFYLEQWLHRNRTNFKHGDKKHGH 694
            LPL++V E     +     +  G+  + VR + +P+  +E W   N    K  +   G 
Sbjct: 525 ILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI--VELWKVFNVAGAK-TEATQGI 581

Query: 695 VVIVQLGMMQIGFVVDALIGQEEVVIKPLGALLHGTPGMAGATITSDGGIALILDVPGL 753
           VVI+Q G  +   +VD LIGQ +VV+K L +     PG++ ATI  DG +ALI+DV  L
Sbjct: 582 VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640