Pairwise Alignments

Query, 641 a.a., flagellar hook-associated protein FlgK (RefSeq) from Shewanella sp. ANA-3

Subject, 681 a.a., flagellar hook protein FlgK from Pseudomonas simiae WCS417

 Score =  263 bits (672), Expect = 2e-74
 Identities = 210/690 (30%), Positives = 327/690 (47%), Gaps = 61/690 (8%)

Query: 3   IDLLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVD 62
           + LL+I  +G+ ASQ  L V SNNIANANT+GY RQ  TQS   S   G  F G+GT + 
Sbjct: 1   MSLLSIGMSGLNASQGALSVLSNNIANANTSGYSRQQTTQSASASNPYGGVFIGSGTTLA 60

Query: 63  DVKRIYNDYAARELRIGQTTLSGAEASYGKLSELDQLFSQIGKMVPQSLNSLFTGLNSLA 122
           DV+R+YN++     +      + A+A   + S +D+  S     +   L++ F  + + A
Sbjct: 61  DVRRVYNEFLDAAYQNSTALNNDAKAYSSQASAIDKTLSDKTTGMSSVLSAFFAAVQTSA 120

Query: 123 DLPADLGIRSSTLNDAKQLANSLNQMQSSLNGQMTQTNDQITGMTKRINEISKELANLNL 182
             P+D+  R   L  A+ L+N  N + + LN Q    N Q+  M+ ++N+++  +A+LN 
Sbjct: 121 ANPSDVSARQVLLTSAQTLSNRFNSISTQLNQQKESINGQLKTMSDQVNQLTSSIASLNK 180

Query: 183 ELMK----SPNQDAMLLDKQDALIQELSQYAQVNVIPQENGAKSIMLGGSVMLVSGEIAM 238
           ++ +    S +  A LLD ++  ++ L++   V  + ++NG  S+  G    LV G+ + 
Sbjct: 181 QITQAQGSSNSAPANLLDARNEAVRSLNELVGVTAV-EKNGVFSVSTGTGQSLVLGDQSN 239

Query: 239 TMDT--KTGDPFPNELQLTSSIGSQSVAADPSKLGGQLGALFEYRDQTLIPASHELDQLA 296
           ++     + DP    +QL +  G  SV       GG +G L  YR   L+PA ++L ++A
Sbjct: 240 SISAVPSSSDPSQYTIQLNAG-GGTSVDMGNVLSGGSIGGLLRYRSDVLMPAINDLGRIA 298

Query: 297 LGIADNFNKMQAQGFDLNGQVGSNIFRDINDPLMSLGR-VGGYSNNTGNATLGVNIDDTR 355
           +  AD  N    QG DLNG  GS++F+DIN       R VG   N+ G+  L V I DT 
Sbjct: 299 IVTADTINSQLGQGVDLNGDFGSSLFKDINSAAAIAQRSVGAAGNSAGSGNLNVTISDTS 358

Query: 356 LLTGGSYELSFTAPASYELRDT--------ETGVITPLTLNGSTLEGGAGFSIDIKAGAM 407
            LT   Y+++FT+  +Y +  +        +T    P  ++G TL      ++D K G M
Sbjct: 359 KLTPYDYKVTFTSGNNYTVMRSDGKSMGAFDTTTTPPPVIDGFTL------ALDGK-GPM 411

Query: 408 ASGDRFVIRPTAGAANGITVEMTDPKGIAAASPKI-TADAANSGN---TQVKLT-QITNR 462
           A+GD F + PTA  A  I  ++ D   IA A P +      N G    T   LT  I   
Sbjct: 412 AAGDSFKVSPTANGATNIGTDLKDANKIAFAGPLLGEGSKTNQGTGTFTPPTLTVPIDIH 471

Query: 463 SAANFP--ITGSELTIQLDTTAIPP------TYEAFDASGTSLGAAA---------PYTP 505
             AN     TG E ++ +      P       Y   DA G  +G  +             
Sbjct: 472 GGANTAQLRTGIEHSMPVKMVFGKPAADGTQAYTVNDAQGNPIGTGSIIPGQTNKITIDV 531

Query: 506 PSISAFGF------TFEVDST---AAASNDRFTFNL-AFAEGDNSNAVAMAKLSESKVM- 554
           P   A G       +F+ D+    A A  D  TF+  A  + DN NA A+  L     + 
Sbjct: 532 PMRDANGALVVPAKSFKFDTAVGGAPADGDSTTFSFNASGKSDNRNAQALLDLQTKATVG 591

Query: 555 ----NGGKSTLADVFENTKIDIGSKTKAAEVRVGSAEAIYQQAYARVESESGVNLDEEAA 610
               +GG  +L          +G+K  +      +  A+ +       S S VNLDEEA 
Sbjct: 592 LADGSGGGVSLVAANSRLVSTVGAKAASGITDTTATGALLKANQDARNSVSQVNLDEEAG 651

Query: 611 NLMRFQQAYQASARIMTTAQQIFDTLLTSV 640
           ++++FQQ Y AS++I+  AQ+ F TL+ S+
Sbjct: 652 DMIKFQQYYTASSQIIKAAQETFSTLINSL 681