Pairwise Alignments

Query, 641 a.a., flagellar hook-associated protein FlgK (RefSeq) from Shewanella sp. ANA-3

Subject, 858 a.a., flagellar hook-associated protein FlgK from Magnetospirillum magneticum AMB-1

 Score = 87.8 bits (216), Expect = 2e-21
 Identities = 130/582 (22%), Positives = 232/582 (39%), Gaps = 86/582 (14%)

Query: 6   LNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVDDVK 65
           LN A +G+L +Q  L V S N+ N NT GY R+   Q T ES+ +     G G     + 
Sbjct: 7   LNSALSGLLTNQKGLDVISQNVVNVNTKGYVRK---QMTPESRVVAG--VGAGVQQGALT 61

Query: 66  RIYNDYAARELRIGQTTLSGAEASYGKLSELDQLFSQIG--KMVPQSLNSLFTGLNSLAD 123
           R  ++   R++R   +T    + +      L+ +F  +G    +   + +L     +LA 
Sbjct: 62  RNVDEGLMRDIRRQTSTQGALDVTQTYYPRLEDMFGTVGSSNSISHQIETLQASFETLAT 121

Query: 124 LPADLGIRSSTLNDAKQLANSLNQMQSSLNGQMTQTNDQITGMTKRINEISKELANLNLE 183
                  +SST+  A  + +  N+M + +     + +  +   T ++N+  +++ +LN +
Sbjct: 122 QVNTPAFQSSTVQTANDMTDQFNEMTTHMQNLRLEADRALHDTTGQVNKQLEDIFDLNQK 181

Query: 184 LMKS---PNQDAMLLDKQDALIQELSQYAQVNVIPQENGAKSIMLGGSVMLVS------G 234
           ++++         L DK+D  +  LS+Y  +    + +G+  +       LV        
Sbjct: 182 IVRNNAIGGDIGDLQDKRDNALTTLSKYMDIQYFERGDGSVGVFTKSGKTLVDKGPAVLS 241

Query: 235 EIAMTMD----TKTGDPFPNELQLTSSIGSQSVAADPSKLGGQLGALFEYRDQTLIPASH 290
            +A T+     T  G  F N+L L S+  S  V  D +   G++ AL + RD  +     
Sbjct: 242 HVATTITDSWMTSAGGNF-NKLTL-STTDSPDVGEDIN--DGEVRALLDLRDTIVPNLQA 297

Query: 291 ELDQLALGIADNFNKMQAQGFDLNGQ----VGSNIFRDINDPLMSLGRVGGYSNNTGNAT 346
           ++D++A  + D  N++  +G     Q    VG+    D N+P ++        +N  N  
Sbjct: 298 QIDEVASKLKDAVNQVHNRGTIFPTQSSKMVGTRQLADPNNPALN-------GSNPQNIW 350

Query: 347 LGVNIDDTRLLTGGSYELSFTAPASYELRDTETGVITPLTLNGSTL---EGGAGFSIDIK 403
              N DDT +             A ++    +    T  T+  ST      GA  ++DI 
Sbjct: 351 FSGN-DDTTI-------------ALFDTNGNQLAATTVRTIMSSTSYTDAAGAATALDIS 396

Query: 404 AGAMASGDRFVIRPTAGAANGITVEMTDPKGIAAASPKITADAANSGNTQVKLTQITNRS 463
             A   G                V+MTD   +AA         +  GN           S
Sbjct: 397 DAATTPG----------------VKMTD---VAAKIQSWMRQQSYQGNIM---------S 428

Query: 464 AANFPITGSELTIQLDTTAIPPTYEAF-DASGTSLGAAAPYTPPSISAFGFTFEVDSTAA 522
           AA+  ++   L +    T +P    AF D   T+ G+AA     +    G   + D   A
Sbjct: 429 AASASVSTGTLVLD---TGVPSVTLAFRDQKATAAGSAAADARINFDVDGDN-KADKQVA 484

Query: 523 ASNDRFTFNLAFAEGDNSNAVAMAKLSESKVMNGGKS-TLAD 563
             ++ F  N  F     ++ V    +S+   +   +S TL+D
Sbjct: 485 GFSNFFGLNDFFTASVPNSIVDSDVVSKDFTLGAARSFTLSD 526



 Score = 70.1 bits (170), Expect = 4e-16
 Identities = 84/345 (24%), Positives = 140/345 (40%), Gaps = 38/345 (11%)

Query: 325 INDPLMSLGRVGGYSNNTGNATLGVNIDDTRLLTGGSYELSFTAP-ASYELRDTETGVIT 383
           ++DP    G++G    NT N + G ++ D         + + +A  +S  L  T T  IT
Sbjct: 524 LSDPT---GKIG----NTINMSAGSSLYDIAKKINAQTQTNESATLSSSSLTTTSTTNIT 576

Query: 384 PLTLNGS----TLEGGAGFSIDIKAGAMASGDRFVIRPTAGAANGITVEMTDPKGIAAAS 439
               NG     +L  G     DI     A G            N   + + D +G+    
Sbjct: 577 INDANGRVTQLSLASGNMTLKDIADAINAQGSSAQAAAVQEGPNAYRLRVWDSRGVPL-- 634

Query: 440 PKITADAANSGNTQVKL---TQITNRSAANFPITGSELTIQLDTTA-----IPPTYEAFD 491
             +T +    G + +K     Q +    A+    G+   +++  T+     +  T +   
Sbjct: 635 -DVTVNGGTIGTSDMKSYLGLQPSQLVEASVIPEGAGYRLRIRQTSDRELFLGATPDTLT 693

Query: 492 ASGTSLGAAAPYTPPSISAFGFTFEVD---STAAASNDRFTFNLAF-----AEGDNSNAV 543
            SG+ +     +T  S  A       D   S A  S     +N        +EGDN+ A+
Sbjct: 694 PSGSFITELKMHTASSRKAGTIAVRTDIQGSPAKVSRGSMQYNTDLGKYFLSEGDNTTAL 753

Query: 544 AMAKLSESKV-------MNGGKSTLADVFENTKIDIGSKTKAAEVRVGSAEAIYQQAYAR 596
           A+     SK        +  G  T A+    +   + +    A+ R      + Q   ++
Sbjct: 754 ALGAAMSSKTDMATAGSLYAGSYTFAEHAAASIAQVSTDAAHAKDRQDYQTTLGQALNSQ 813

Query: 597 VESESGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLLTSVR 641
             S SGVNLDEE AN++ FQQAY ASA++++T Q++ DTL+  V+
Sbjct: 814 FASTSGVNLDEEVANMINFQQAYSASAKVISTLQEMLDTLVNIVK 858