Pairwise Alignments

Query, 641 a.a., flagellar hook-associated protein FlgK (RefSeq) from Shewanella sp. ANA-3

Subject, 553 a.a., Flagellar hook-associated protein FlgK from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  167 bits (424), Expect = 9e-46
 Identities = 132/470 (28%), Positives = 201/470 (42%), Gaps = 31/470 (6%)

Query: 5   LLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVDDV 64
           L+N A +G+ A+Q+ L   SNNI N N AGY RQ    +   S      + G G YV  V
Sbjct: 4   LINHAMSGLNAAQAALNTVSNNINNYNVAGYTRQTTILAQANSTLGAGGWIGNGVYVSGV 63

Query: 65  KRIYNDYAARELRIGQTTLSGAEASYGKLSELDQLFSQIGKMVPQSLNSLFTGLNSLADL 124
           +R Y+ +   +LR  Q   SG    Y ++S++D L +     +  SL S FT L +L   
Sbjct: 64  QREYDAFITNQLRGAQNQSSGLTTRYEQMSKIDNLLADKSSSLSGSLQSFFTSLQTLVSN 123

Query: 125 PADLGIRSSTLNDAKQLANSLNQMQSSLNGQMTQTNDQITGMTKRINEISKELANLNLEL 184
             D   R + +  A+ L N        L  Q  Q N  I     +IN  +K++ANLN ++
Sbjct: 124 AEDPAARQALIGKAEGLVNQFKTTDQYLRDQDKQVNIAIGSSVAQINNYAKQIANLNDQI 183

Query: 185 MK--------SPNQDAMLLDKQDALIQELSQYAQVNVIPQENGAKSIMLGGSVMLVSGEI 236
            +        SPN    LLD++D L+ EL++   V V  Q+ G  ++ +     LV G  
Sbjct: 184 SRMTGVGAGASPND---LLDQRDQLVSELNKIVGVEVSVQDGGTYNLTMANGYTLVQGST 240

Query: 237 AMTMDTKTGDPFPNELQLTSSIGSQSVAADPSKL--GGQLGALFEYRDQTLIPASHELDQ 294
           A  +        P    +     +      P KL   G LG L  +R Q L    + L Q
Sbjct: 241 ARQLAAVPSSADPTRTTVAYVDEAAGNIEIPEKLLNTGSLGGLLTFRSQDLDQTRNTLGQ 300

Query: 295 LALGIADNFNKMQAQGFDLNGQVGSNIFRDINDPLMSLGRVGGYSNNTG---NATLGVNI 351
           LAL  AD FN    +G+D +G  G + F        S+G    YSN+       +L   +
Sbjct: 301 LALAFADAFNAQHTKGYDADGNKGKDFF--------SIGSPVVYSNSNNADKTVSLTAKV 352

Query: 352 DDTRLLTGGSYELSFTAPASYELRDTETGVITPLTLNGSTLEGGAGFSIDIKAGAMASGD 411
            D+  +    Y++ F        R  +    T        LE   G  + +  GA    D
Sbjct: 353 VDSTKVQATDYKIVFDGTDWQVTRTADNTTFTATKDADGKLEID-GLKVTVGTGAQ-KND 410

Query: 412 RFVIRPTAGAANGITVEMTDPKGIAAAS-----PKITADAANSGNTQVKL 456
            F+++P + A   + V++T+   IA AS     P +    +++ N Q  L
Sbjct: 411 SFLLKPVSNAIVDMNVKVTNEAEIAMASESKLDPDVDTGDSDNRNGQALL 460



 Score = 79.7 bits (195), Expect = 3e-19
 Identities = 63/220 (28%), Positives = 100/220 (45%), Gaps = 22/220 (10%)

Query: 439 SPKITADAANSGNT---QVKLTQITNRSAANFPI----TGSELTIQLDTTAIPPTYEA-- 489
           SP + +++ N+  T     K+   T   A ++ I    T  ++T   D T    T +A  
Sbjct: 332 SPVVYSNSNNADKTVSLTAKVVDSTKVQATDYKIVFDGTDWQVTRTADNTTFTATKDADG 391

Query: 490 ---FDASGTSLGAAAPYT------PPSISAFGFTFEVDSTAA---ASNDRFTFNLAFAEG 537
               D    ++G  A         P S +      +V + A    AS  +   ++   + 
Sbjct: 392 KLEIDGLKVTVGTGAQKNDSFLLKPVSNAIVDMNVKVTNEAEIAMASESKLDPDVDTGDS 451

Query: 538 DNSNAVAMAKLSESKVMNGGKSTLADVFENTKIDIGSKTKAAEVRVGSAEAIYQQAYARV 597
           DN N  A+  L  S V+ GG  T  D +     D+G+KT   +    +   + +Q Y + 
Sbjct: 452 DNRNGQALLDLQNSNVV-GGNKTFNDAYATLVSDVGNKTSTLKTSSTTQANVVKQLYKQQ 510

Query: 598 ESESGVNLDEEAANLMRFQQAYQASARIMTTAQQIFDTLL 637
           +S SGVNLDEE  NL R+QQ Y A+A+++ TA  +FD LL
Sbjct: 511 QSVSGVNLDEEYGNLQRYQQYYLANAQVLQTANALFDALL 550