Pairwise Alignments

Query, 641 a.a., flagellar hook-associated protein FlgK (RefSeq) from Shewanella sp. ANA-3

Subject, 547 a.a., flagellar hook-filament junction protein 1 from Escherichia coli BL21

 Score =  179 bits (455), Expect = 2e-49
 Identities = 132/458 (28%), Positives = 199/458 (43%), Gaps = 29/458 (6%)

Query: 5   LLNIARTGVLASQSQLGVTSNNIANANTAGYHRQVATQSTLESQRLGNSFYGTGTYVDDV 64
           L+N A +G+ A+Q+ L   SNNI++ N AGY RQ    +   S      + G G YV  V
Sbjct: 4   LINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQANSTLGAGGWVGNGVYVSGV 63

Query: 65  KRIYNDYAARELRIGQTTLSGAEASYGKLSELDQLFSQIGKMVPQSLNSLFTGLNSLADL 124
           +R Y+ +   +LR  QT  SG  A Y ++S++D + S     +   +   FT L +L   
Sbjct: 64  QREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTSTSSLATQMQDFFTSLQTLVSN 123

Query: 125 PADLGIRSSTLNDAKQLANSLNQMQSSLNGQMTQTNDQITGMTKRINEISKELANLNLEL 184
             D   R + +  ++ L N        L  Q  Q N  I     +IN  +K++A+LN ++
Sbjct: 124 AEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNIAIGASVDQINNYAKQIASLNDQI 183

Query: 185 MK--------SPNQDAMLLDKQDALIQELSQYAQVNVIPQENGAKSIMLGGSVMLVSGEI 236
            +        SPN    LLD++D L+ EL+Q   V V  Q+ G  +I +     LV G  
Sbjct: 184 SRLTGVGAGASPNN---LLDQRDQLVSELNQIVGVEVSVQDGGTYNITMANGYSLVQGST 240

Query: 237 AMTMDTKTGDPFPNELQLTSSIGSQSVAADPSKL--GGQLGALFEYRDQTLIPASHELDQ 294
           A  +        P+   +    G+      P KL   G LG +  +R Q L    + L Q
Sbjct: 241 ARQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLNTGSLGGILTFRSQDLDQTRNTLGQ 300

Query: 295 LALGIADNFNKMQAQGFDLNGQVGSNIFRDINDPLMSLGRVGGYSN--NTGNATLGVNID 352
           LAL  A+ FN     GFD NG  G + F        ++G+     N  N G+  +G  + 
Sbjct: 301 LALAFAEAFNTQHKAGFDANGDAGEDFF--------AIGKPAVLQNTKNKGDVAIGATVT 352

Query: 353 DTRLLTGGSYELSF--TAPASYELRDTETGVITPLTLNGSTLEGGAGFSIDIKAGAMASG 410
           D   +    Y++SF         L    T  +TP   NG     G   +     G  A  
Sbjct: 353 DASAVLATDYKISFDNNQWQVTRLASNTTFTVTP-DANGKVAFDGLELTF---TGTPAVN 408

Query: 411 DRFVIRPTAGAANGITVEMTDPKGIAAASPKITADAAN 448
           D F ++P + A   + V +TD   IA AS +   D+ N
Sbjct: 409 DSFTLKPVSDAIVNMDVLITDEAKIAMASEEDAGDSDN 446