Pairwise Alignments

Query, 497 a.a., extracellular solute-binding protein (RefSeq) from Shewanella sp. ANA-3

Subject, 577 a.a., Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 44.7 bits (104), Expect = 9e-09
 Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 20/193 (10%)

Query: 53  ITLVAEKGFWTDYLTREMLPKFTEKTGVKVNVVSTELESMFELQTQALLQGEGKYDLLTM 112
           I++V+E     +Y ++ +   F E TG+ V     +   + E    ++  G+  YD    
Sbjct: 68  ISVVSETITTHEYESKTLAKAFAEITGITVKHDLIQEGDVVEKLQTSMQSGKSIYD---- 123

Query: 113 EAGWAKEWAANGYTVPLPELAKLYDPDGEKAMERYLEPYYPSLLNILSYHG--------- 163
             GW  +    G      ++  L D    K  E Y  P     L+I  + G         
Sbjct: 124 --GWISDSDLIGTHYRYGKMMNLTDYMAGKGKE-YTNPG----LDIKDFIGTSFTTAPDK 176

Query: 164 ELHAIPYNNYVMGSHYRADLFENKTEQTHFQQRFGYPLKPATNFDELQDQAVFFTRKSGE 223
           +L+ +P   +     +RADLF+ K  +  F+ ++GY L    N+   +D A FFT     
Sbjct: 177 KLYQLPDQQFANLYWFRADLFDRKDLKDKFKAKYGYDLGVPLNWSAYEDIAEFFTNDVKT 236

Query: 224 LLADKQLSHNFYG 236
           +       H  YG
Sbjct: 237 IDGKPIYGHMDYG 249