Pairwise Alignments

Query, 275 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella sp. ANA-3

Subject, 280 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

 Score =  212 bits (539), Expect = 8e-60
 Identities = 115/257 (44%), Positives = 157/257 (61%), Gaps = 1/257 (0%)

Query: 14  LVMTYGLKILFALIIFFVGKYFSGVAQKLVRKVLNSRKIDPTVVSFVANLAWAVVFVFTI 73
           ++M YG + L A++   +G +   V    V ++L  R  D  +  F+ +LA   + V  +
Sbjct: 20  MIMEYGSRFLLAVVTLAIGWWLINVLTHRVGRLLALRNADLALQHFITSLANIALKVMLV 79

Query: 74  IATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRVGDYIEAAGIA 133
           +     IGV T S VA IGAA LA+GLALQGSL+NFA GVL++LFRP R+GD+IEA G +
Sbjct: 80  VNVASMIGVATTSFVAAIGAATLAIGLALQGSLANFAGGVLILLFRPFRIGDWIEAQGTS 139

Query: 134 GTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSASENRRIDLVIGVSYSADIAQTK 193
           GTVD I IF T LRT DNK ++ PN S+ NG ITN +    R++   +GV Y AD+ + +
Sbjct: 140 GTVDSIQIFHTVLRTGDNKTVIIPNGSLSNGLITNTNRQPTRKVVFDVGVDYEADLQKAR 199

Query: 194 KVLTEILDNNQYVLKEPGYTIGLSELANSSINFVVRPWVKTADYWTARFQILEQIKNALD 253
           +VL E L  +  VL +P     +S L +SSI   +R W KTADYW   F + E  ++ L 
Sbjct: 200 EVLLE-LAKDPRVLADPAAVAVVSTLGDSSITVSLRCWTKTADYWDVVFMLNELARDRLK 258

Query: 254 AANIEIPFPQMDIHVKQ 270
           AA I+IPFPQ  I V Q
Sbjct: 259 AAGIDIPFPQRVIRVMQ 275