Pairwise Alignments

Query, 275 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella sp. ANA-3

Subject, 280 a.a., mechanosensitive ion channel from Pseudomonas fluorescens SBW25

 Score =  206 bits (524), Expect = 5e-58
 Identities = 109/257 (42%), Positives = 154/257 (59%), Gaps = 1/257 (0%)

Query: 14  LVMTYGLKILFALIIFFVGKYFSGVAQKLVRKVLNSRKIDPTVVSFVANLAWAVVFVFTI 73
           ++M YG + L A++   +G +   V    V ++L  R  D  +  F+  LA   + +  +
Sbjct: 20  MIMEYGSRFLLAMVTLVIGWWLINVLTHRVGRLLALRNADMALQHFITRLANIALKIMLV 79

Query: 74  IATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRVGDYIEAAGIA 133
           +     IGV T S +A IGAA LA+G+ALQGSL+NFA GVL++LFRP R+GD+IEA G +
Sbjct: 80  VNVASMIGVATTSFIAAIGAATLAIGMALQGSLANFAGGVLILLFRPFRLGDWIEAQGTS 139

Query: 134 GTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSASENRRIDLVIGVSYSADIAQTK 193
           GTVD I IF T LRT DNK ++ PN  + NG ITN +    R++   +GV Y AD+ + +
Sbjct: 140 GTVDSIQIFHTVLRTGDNKTVIVPNGILSNGIITNTNRQPTRKVVFDVGVDYEADLQKAR 199

Query: 194 KVLTEILDNNQYVLKEPGYTIGLSELANSSINFVVRPWVKTADYWTARFQILEQIKNALD 253
           +VL E L  +  VL +P     +S L +SSI   +R W KT+DYW   F + E  ++ L 
Sbjct: 200 EVLLE-LSKDPRVLADPAAVAVVSTLGDSSITVSLRCWTKTSDYWDVVFMLNELARDRLK 258

Query: 254 AANIEIPFPQMDIHVKQ 270
            A I+IPFPQ  I V Q
Sbjct: 259 EAGIDIPFPQRVIRVMQ 275