Pairwise Alignments

Query, 275 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella sp. ANA-3

Subject, 294 a.a., small-conductance mechanosensitive channel MscS from Erwinia tracheiphila SCR3

 Score =  240 bits (613), Expect = 2e-68
 Identities = 125/257 (48%), Positives = 173/257 (67%), Gaps = 1/257 (0%)

Query: 14  LVMTYGLKILFALIIFFVGKYFSGVAQKLVRKVLNSRKIDPTVVSFVANLAWAVVFVFTI 73
           L+++Y + I+ A+ I  VG   + +    + K+L +R ID TVV F++ L    +  FT 
Sbjct: 23  LLLSYAVNIVAAIAILIVGMIMARLISNTLNKLLVARHIDATVVDFLSALVRYGLIAFTF 82

Query: 74  IATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRVGDYIEAAGIA 133
           IA LG+IGVQTAS++AV+GAAGLAVGLALQGSLSN A+GVL+V+FRP R GD+I+  G+ 
Sbjct: 83  IAALGRIGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRTGDFIDI-GVM 141

Query: 134 GTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSASENRRIDLVIGVSYSADIAQTK 193
           GTV  + IFST L++ D K++V PN  I+ G I NYS    RR + +IGVSY AD+    
Sbjct: 142 GTVTSVQIFSTTLKSSDGKIVVVPNGKIIAGNIVNYSREPVRRNEFIIGVSYDADVDNVI 201

Query: 194 KVLTEILDNNQYVLKEPGYTIGLSELANSSINFVVRPWVKTADYWTARFQILEQIKNALD 253
           K+  E++D    VL++ G  IGL+ELA SS+NFVVR W    D     + +++  K ALD
Sbjct: 202 KLFQEVVDAEPRVLQDRGVQIGLNELAASSMNFVVRCWSNAGDLQNVYWDLMKNFKRALD 261

Query: 254 AANIEIPFPQMDIHVKQ 270
           A +I IP+PQMD+H+ Q
Sbjct: 262 ANDIGIPYPQMDVHLHQ 278