Pairwise Alignments

Query, 275 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella sp. ANA-3

Subject, 286 a.a., mechanosensitive channel protein, small conductance from Escherichia coli BL21

 Score =  253 bits (646), Expect = 3e-72
 Identities = 127/262 (48%), Positives = 179/262 (68%)

Query: 14  LVMTYGLKILFALIIFFVGKYFSGVAQKLVRKVLNSRKIDPTVVSFVANLAWAVVFVFTI 73
           L+++Y + I+ AL I  VG   + +    V +++ SRKID TV  F++ L    +  FT+
Sbjct: 23  LLLSYAVNIVAALAIIIVGLIIARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTL 82

Query: 74  IATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRVGDYIEAAGIA 133
           IA LG++GVQTAS++AV+GAAGLAVGLALQGSLSN A+GVL+V+FRP R G+Y++  G+A
Sbjct: 83  IAALGRVGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVA 142

Query: 134 GTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSASENRRIDLVIGVSYSADIAQTK 193
           GTV  + IFST +RT D K+IV PN  I+ G I N+S    RR + +IGV+Y +DI Q K
Sbjct: 143 GTVLSVQIFSTTMRTADGKIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVK 202

Query: 194 KVLTEILDNNQYVLKEPGYTIGLSELANSSINFVVRPWVKTADYWTARFQILEQIKNALD 253
           ++LT I+ +   +LK+   T+ L+EL  SSINFVVR W  + D     + +LE+IK   D
Sbjct: 203 QILTNIIQSEDRILKDREMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFD 262

Query: 254 AANIEIPFPQMDIHVKQLPESK 275
           AA I  P+PQMD++ K++ E K
Sbjct: 263 AAGISFPYPQMDVNFKRVKEDK 284