Pairwise Alignments

Query, 409 a.a., DEAD/DEAH box helicase domain-containing protein (RefSeq) from Shewanella sp. ANA-3

Subject, 549 a.a., RNA helicase from Ralstonia solanacearum PSI07

 Score =  390 bits (1002), Expect = e-113
 Identities = 206/405 (50%), Positives = 275/405 (67%), Gaps = 9/405 (2%)

Query: 1   MSFSALSLHSQLVNTLAELGYQQPTPIQIEAIPAILAKQDVMAGAQTGTGKTAAFALPIL 60
           MSFS L L  +LV  +AELGY +PTPIQ +AIPAIL   D++AGAQTGTGKTA F LP+L
Sbjct: 1   MSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTAGFTLPLL 60

Query: 61  QQLLID-----NESQDAPKDVRALVLVPTRELAVQVQQSFVKYAKGTDIRVGIAYGGVSI 115
            +L        + S      +RALVL PTRELA QV++S   Y K   ++  + +GGV I
Sbjct: 61  HRLSAVQPNKVHTSHGMRYPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGI 120

Query: 116 EAQQAEFKAGIDVLIATPGRLLDHLRQGALNLKRLSVLVFDEADRMLDMGFMDEIKAVLK 175
             Q    K G+D+++ATPGRLLDH+ Q  ++L  + +LV DEADRMLDMGF+ +I+ +L 
Sbjct: 121 NPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIHDIRKILN 180

Query: 176 QVPAQRQTLLFSATLDDSIFGFSKNLLRDPKLIEVAKRNTTAAQVEQRVYAIDSDRKTEF 235
            +P +RQ LLFSAT  D I   +  LL  P LIEVA+RNTTA  VEQR+Y +D +RK E 
Sbjct: 181 ILPPKRQNLLFSATFSDDIRALADRLLDQPALIEVARRNTTAETVEQRIYPVDRERKREL 240

Query: 236 VSHLVRSKNWQQVLIFSRTKQGVDKLTTQLNQLGVATQAFHGDLSQGAREKVLKDFKQGL 295
           ++ LVR  +W QVL+F+RTK G ++L  QL + G+   A HG+ SQ AR + L +FK G 
Sbjct: 241 LAKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGIPALAIHGNKSQSARTRALSEFKAGT 300

Query: 296 VQVLVATDVAARGLDIADLQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDAL 355
           ++VLVATD+AARG+DI  L +V+NF+LP + EDY+HRIGRTGRAG+ G AI+L   ++  
Sbjct: 301 LRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHG 360

Query: 356 LLEEVEALLDKRLPQQWYPGFEPDFNKMEPEP---RRNSKAAQKQ 397
           LL ++E L+ + LP+   PGFEPD   + PEP    RNS  + +Q
Sbjct: 361 LLRDIERLIKRELPRTVLPGFEPD-PTIAPEPIPNGRNSARSPRQ 404