Pairwise Alignments

Query, 357 a.a., recombinase A (RefSeq) from Shewanella sp. ANA-3

Subject, 371 a.a., recombinase RecA from Variovorax sp. OAS795

 Score =  461 bits (1187), Expect = e-134
 Identities = 225/323 (69%), Positives = 279/323 (86%), Gaps = 1/323 (0%)

Query: 7   KEKALAAVLSQIEKQFGKGSIMKLGEDRSM-DVETISTGSLSLDVALGAGGLPMGRIVEI 65
           K KAL A L+QIEKQFGKG+IM+LGE  ++ D++ +STGSL LD+ALG GGLP GR++EI
Sbjct: 17  KAKALQAALAQIEKQFGKGTIMRLGEGEALEDIQVVSTGSLGLDIALGVGGLPRGRVIEI 76

Query: 66  YGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQ 125
           YGPESSGKTTLTL+VIAA Q++  TCAF+DAEHALD  YA+KLGV++ +LL SQPDTGEQ
Sbjct: 77  YGPESSGKTTLTLQVIAAMQKQAGTCAFVDAEHALDVQYAQKLGVNLSDLLISQPDTGEQ 136

Query: 126 ALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQ 185
           ALEI D+L RSGAVD+I++DSVAALTPKAEIEGE+GDS  GL AR+MSQA+RKL   +K+
Sbjct: 137 ALEIVDSLVRSGAVDLIVIDSVAALTPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKK 196

Query: 186 SNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNETRV 245
           +N ++IFINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRR G IK+GDE +GNET+V
Sbjct: 197 TNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGTIKKGDEAIGNETKV 256

Query: 246 KVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQGRAN 305
           KVVKNKV+ PFK AEF IL+G+GI+R GE++D+GV  K+++K+GAWY+Y G+KIGQGR N
Sbjct: 257 KVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVTAKILDKSGAWYAYNGEKIGQGRDN 316

Query: 306 AGKYLTENPAIAAEIDKTLRELL 328
           A ++L ENP ++ EI+  +RE L
Sbjct: 317 AREFLRENPELSREIENKVRESL 339