Pairwise Alignments

Query, 357 a.a., recombinase A (RefSeq) from Shewanella sp. ANA-3

Subject, 354 a.a., RecA protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  486 bits (1252), Expect = e-142
 Identities = 245/353 (69%), Positives = 294/353 (83%), Gaps = 5/353 (1%)

Query: 3   VDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRI 62
           +D NK+KALAA L QIE+QFGKG++M++G+     +  ISTGSL LD+ALG GGLP GRI
Sbjct: 1   MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRI 60

Query: 63  VEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDT 122
           VEIYGPESSGKTTLTL VIA AQ+ G TCAF+DAEHALDP YA KLGV++D+LL SQPDT
Sbjct: 61  VEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT 120

Query: 123 GEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
           GEQALEI D L RS A+DVI+VDSVAAL PKAEIEGE+GD H+GL AR+MSQA+RK+ GN
Sbjct: 121 GEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 180

Query: 183 LKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNE 242
           +K +N L+IFINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRRTGA+KEGDEVVG+E
Sbjct: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240

Query: 243 TRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQG 302
           TRVKVVKNKVA PF+QAEFQILYG+GI   GE+VDL V H  +EK+GAWYSY+G KIGQG
Sbjct: 241 TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEIVDLAVLHGFVEKSGAWYSYQGSKIGQG 300

Query: 303 RANAGKYLTENPAIAAEIDKTLRELLLS---NPSAMSS--SSSDDENSEGNVD 350
           +AN+ K+L +NP I   ++K +R+ LL+   +  A+ S  + + D+ SE +VD
Sbjct: 301 KANSAKFLADNPEICKALEKQIRDKLLTPGVDTKAVGSREAVAADDMSEADVD 353